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  5. LOC_Os08g23720.1

LOC_Os08g23720.1 (LOC_Os08g23720)


Aliases : LOC_Os08g23720

Description : Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana (sp|q9m088|e135_arath : 432.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 247.8)


Gene families : OG0000517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g23720.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00188990 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
Adi_g088185 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25671 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20624 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01364 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g12676 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31391 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13444 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.15G060300.1 Ceric.15G060300 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g04581 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10549 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03838 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g10896 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015618 No alias EC_3.2 glycosylase & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Tin_g05543 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 36 355
IPR012946 X8 376 444
No external refs found!