- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os08g23540
Description : no hits & (original description: none)
Gene families : OG0000761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000761_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os01g01200.1 | LOC_Os01g01200 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g13960.1 | LOC_Os01g13960 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g32510.1 | LOC_Os01g32510 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g36440.1 | LOC_Os01g36440 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g17580.1 | LOC_Os02g17580 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g17810.1 | LOC_Os02g17810 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g18280.1 | LOC_Os02g18280 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g21130.1 | LOC_Os02g21130 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os02g32100.1 | LOC_Os02g32100 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g41690.1 | LOC_Os02g41690 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g45990.1 | LOC_Os02g45990 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os02g47250.1 | LOC_Os02g47250 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g14750.1 | LOC_Os03g14750 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g24800.1 | LOC_Os03g24800 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g25580.1 | LOC_Os03g25580 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g30100.1 | LOC_Os03g30100 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g05820.1 | LOC_Os04g05820 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g11470.1 | LOC_Os04g11470 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g11720.1 | LOC_Os04g11720 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g13100.1 | LOC_Os04g13100 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g14780.1 | LOC_Os04g14780 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g17730.1 | LOC_Os04g17730 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os04g23390.1 | LOC_Os04g23390 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os04g49040.1 | LOC_Os04g49040 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g54150.1 | LOC_Os04g54150 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g19080.1 | LOC_Os05g19080 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g24030.1 | LOC_Os05g24030 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g31850.1 | LOC_Os05g31850 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g41680.1 | LOC_Os05g41680 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g03260.1 | LOC_Os06g03260 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os06g43330.1 | LOC_Os06g43330 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g44740.1 | LOC_Os06g44740 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g13700.1 | LOC_Os07g13700 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g14790.1 | LOC_Os07g14790 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os07g24480.1 | LOC_Os07g24480 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g24560.1 | LOC_Os07g24560 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g24800.1 | LOC_Os07g24800 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g40060.1 | LOC_Os07g40060 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g43110.1 | LOC_Os07g43110 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g08400.1 | LOC_Os08g08400 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g08600.1 | LOC_Os08g08600 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g12910.1 | LOC_Os08g12910 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g17450.1 | LOC_Os08g17450 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g25980.1 | LOC_Os08g25980 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g27940.1 | LOC_Os08g27940 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g32020.1 | LOC_Os08g32020 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g40340.1 | LOC_Os08g40340 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os09g01990.1 | LOC_Os09g01990 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os09g12320.1 | LOC_Os09g12320 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g14110.1 | LOC_Os09g14110 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os09g14210.1 | LOC_Os09g14210 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os09g21310.1 | LOC_Os09g21310 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g27800.1 | LOC_Os09g27800 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g02150.1 | LOC_Os10g02150 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g03120.1 | LOC_Os10g03120 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os10g20220.1 | LOC_Os10g20220 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os10g34650.1 | LOC_Os10g34650 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os10g40190.1 | LOC_Os10g40190 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os11g09290.1 | LOC_Os11g09290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g19120.1 | LOC_Os11g19120 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os11g19930.1 | LOC_Os11g19930 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g22180.1 | LOC_Os11g22180 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g25950.1 | LOC_Os11g25950 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os11g37290.1 | LOC_Os11g37290 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g11890.1 | LOC_Os12g11890 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g15910.1 | LOC_Os12g15910 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os12g22230.1 | LOC_Os12g22230 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g24210.1 | LOC_Os12g24210 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g30270.1 | LOC_Os12g30270 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g33010.1 | LOC_Os12g33010 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |