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  5. LOC_Os08g18044.2

LOC_Os08g18044.2 (TOM2A, LOC_Os08g18044)


Aliases : TOM2A, LOC_Os08g18044

Description : TOM2A tobamovirus multiplication replication host factor


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g18044.2
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Adi_g023224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08943 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g26082 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001112 No alias not classified & original description: CDS=37-732 0.02 OrthoFinder output from all 47 species
Azfi_s0144.g051608 TOM2A not classified & original description: CDS=40-957 0.02 OrthoFinder output from all 47 species
Ceric.13G064500.1 TOM2A, Ceric.13G064500 not classified & original description: pacid=50635493... 0.02 OrthoFinder output from all 47 species
Msp_g05492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04736 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16652 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23989 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05104 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012928 No alias not classified & original description: CDS=25-411 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018542 TOM2A not classified & original description: CDS=285-1187 0.03 OrthoFinder output from all 47 species
Sam_g12321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo228108 No alias Tetraspanin-18 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g07255 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11017 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24993 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14991 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44233 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037814_P001 TOM2A, Zm00001e037814 TOM2A tobamovirus multiplication replication host factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 9 140
No external refs found!