LOC_Os08g16460.1 (LOC_Os08g16460)

Aliases : LOC_Os08g16460

Description : Putative disease resistance protein RGA1 OS=Solanum bulbocastanum (sp|q7xa42|rga1_solbu : 239.0)

Gene families : OG0015465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0015465_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g16460.1
Cluster	HCCA: Cluster_86

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	590	611
IPR001611	Leu-rich_rpt	566	587
IPR001611	Leu-rich_rpt	447	467
IPR001611	Leu-rich_rpt	660	702
IPR001611	Leu-rich_rpt	491	552
IPR002182	NB-ARC	56	270

External Links

No external refs found!