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  5. LOC_Os08g15500.1

LOC_Os08g15500.1 (PGR7, LOC_Os08g15500)


Aliases : PGR7, LOC_Os08g15500

Description : regulatory glutamyl-tRNA reductase-binding protein


Gene families : OG0005479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g15500.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Ala_g19774 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.02 OrthoFinder output from all 47 species
Aop_g19943 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.02 OrthoFinder output from all 47 species
Aspi01Gene42221.t1 Aspi01Gene42221 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.03 OrthoFinder output from all 47 species
Ceric.15G026600.1 PGR7, Ceric.15G026600 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.03 OrthoFinder output from all 47 species
Cre03.g156600 No alias Glutamyl-tRNA reductase-binding protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
Dcu_g03694 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.05 OrthoFinder output from all 47 species
Dde_g08598 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.03 OrthoFinder output from all 47 species
Ehy_g13322 No alias regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.03 OrthoFinder output from all 47 species
GSVIVT01016137001 PGR7 Glutamyl-tRNA reductase-binding protein, chloroplastic... 0.13 OrthoFinder output from all 47 species
Len_g08515 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.05 OrthoFinder output from all 47 species
Mp1g03280.1 No alias regulatory glutamyl-tRNA reductase-binding protein 0.04 OrthoFinder output from all 47 species
Msp_g27266 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.02 OrthoFinder output from all 47 species
Nbi_g04637 No alias regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.03 OrthoFinder output from all 47 species
Ore_g41228 No alias regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.05 OrthoFinder output from all 47 species
Ppi_g01872 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004956 No alias regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.04 OrthoFinder output from all 47 species
Sam_g09979 No alias regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.08 OrthoFinder output from all 47 species
Solyc03g123880.3.1 PGR7, Solyc03g123880 regulatory glutamyl-tRNA reductase-binding protein 0.08 OrthoFinder output from all 47 species
Spa_g04454 PGR7 regulatory protein *(GluTRBP) of glutamyl-tRNA reductase... 0.02 OrthoFinder output from all 47 species
Zm00001e021560_P005 PGR7, Zm00001e021560 regulatory glutamyl-tRNA reductase-binding protein 0.23 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019595 DUF2470 216 288
No external refs found!