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  5. LOC_Os08g13300.1

LOC_Os08g13300.1 (LOC_Os08g13300)


Aliases : LOC_Os08g13300

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g13300.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 LOC_Os01g03590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19590.1 LOC_Os01g19590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g46330.1 LOC_Os01g46330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74210.1 LOC_Os01g74210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g01420.1 LOC_Os02g01420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g08280.1 LOC_Os02g08280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g25370.1 LOC_Os02g25370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25520.1 LOC_Os02g25520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g49290.1 LOC_Os02g49290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43280.1 LOC_Os03g43280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g54020.1 LOC_Os03g54020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g06010.1 LOC_Os04g06010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g07170.1 LOC_Os04g07170 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g11410.1 LOC_Os04g11410 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os04g22840.1 LOC_Os04g22840 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g26000.1 LOC_Os04g26000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g16350.1 LOC_Os05g16350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g16580.1 LOC_Os05g16580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g18570.1 LOC_Os05g18570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g18990.1 LOC_Os05g18990 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os05g19700.1 LOC_Os05g19700 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48110.1 LOC_Os05g48110 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
LOC_Os06g16900.1 LOC_Os06g16900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g35350.1 LOC_Os06g35350 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g42670.1 LOC_Os06g42670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g15800.1 LOC_Os07g15800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g17510.1 LOC_Os07g17510 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g03730.1 LOC_Os08g03730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g08950.1 LOC_Os08g08950 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os08g17120.1 LOC_Os08g17120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g21140.1 LOC_Os08g21140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g37220.1 LOC_Os09g37220 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g02010.1 LOC_Os10g02010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g07554.1 LOC_Os10g07554 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08370.1 LOC_Os10g08370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g10770.1 LOC_Os10g10770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g12539.1 LOC_Os10g12539 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g29010.1 LOC_Os10g29010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g14350.1 LOC_Os11g14350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g40960.1 LOC_Os11g40960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g41050.1 LOC_Os11g41050 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g01640.1 LOC_Os12g01640 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g05240.1 LOC_Os12g05240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g13080.1 LOC_Os12g13080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g14820.1 LOC_Os12g14820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g16400.1 LOC_Os12g16400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g22910.1 LOC_Os12g22910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g24680.1 LOC_Os12g24680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g25300.1 LOC_Os12g25300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g31980.1 LOC_Os12g31980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os12g36480.1 LOC_Os12g36480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g37240.1 LOC_Os12g37240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 997 1110
No external refs found!