Heatmap: Cluster_172 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Ovule
Ovary
Egg cell
Pollen tricellular
Pollen
Sperm
Flower (buds)
Flower
Panicle
Milk grains
Seeds
Seedling
Seedling (12-day-old, DongJin)
Seedling (12-day-old, DongJin, mutant)
Seedling (22-days-old, 22C)
Seedling (22-days-old, 30C)
Meristem
Stems
Callus
Leaf
Leaf (Azucena)
Leaf (Kinandang puti)
Leaf (Pandan wangi)
Leaf (Tadukan)
Leaf (chilling-treatment, 4C, 33h)
Leaf (drought-stress, 1 day)
Leaf (drought-stress, 3 days)
Leaf (drought-stress, 15 min)
Leaf (drought-stress, 45 min)
Leaf (drought-stress, 90 min)
Leaf (drought-stress, 90 min, recovery 15 min)
Leaf (drought-stress, 90 min, recovery 90 min)
Leaf (drought-stress, 90 min, recovery 210 min)
Leaf (heat-stress, 15 min)
Leaf (heat-stress, 150 min)
Leaf (heat-stress, 210 min)
Leaf (heat-stress, 120 min, recovery 15 min)
Leaf (heat-stress, 120 min, recovery 60 min)
Leaf (heat-stress, 120 min, recovery 120 min)
Leaf (dry season, irrigated field)
Leaf (dry season, rainfed field)
Leaf (wet season, irrigated field)
Leaf (wet season, rainfed field)
Root
Root (heading stage)
Root (tillering stage)
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
LOC_Os01g05620.1 (LOC_Os01g05620)
1.08 0.37 0.14 -3.32 -2.29 -1.29 0.65 0.87 -0.22 -1.04 -1.0 -0.3 0.28 0.03 -3.28 -3.74 1.25 -1.79 -1.62 1.45 -3.09 -3.72 -3.38 -3.65 -4.0 3.1 3.16 -3.52 -4.56 -4.63 -3.8 -1.57 -3.05 -4.29 -3.83 -2.19 -3.27 -2.83 -2.05 -4.71 -3.24 -4.27 -3.52 0.7 1.9 1.07 -1.77 -0.64 0.51
LOC_Os01g74380.1 (LOC_Os01g74380)
-3.89 -1.36 -6.01 -5.8 - -3.46 -5.15 -5.06 -4.4 -5.05 -3.07 -1.57 -5.72 4.19 - - -7.04 -3.57 - 2.3 -5.96 -5.86 -4.09 -6.79 0.06 -2.76 4.51 -4.58 - - - -2.38 - -5.27 - - -8.17 - -4.89 -7.64 -5.35 -5.82 -5.44 -9.1 -5.11 -4.54 - -3.6 -
LOC_Os02g53240.1 (LOC_Os02g53240)
-5.78 -1.5 -0.78 -5.4 -6.21 -1.32 -5.74 -7.21 0.37 -4.33 -1.82 -0.58 2.19 3.01 -3.46 -0.82 - -1.04 0.08 1.73 -7.42 -3.76 -7.42 -2.6 -0.22 3.52 3.69 - - -5.33 - - - - - -4.58 -5.46 - - -6.89 -5.4 -6.7 -5.58 -4.12 -2.14 -5.3 -1.12 -3.69 -0.78
LOC_Os02g57305.1 (LOC_Os02g57305)
-1.78 0.06 -1.34 - -6.76 -4.27 -3.3 -5.04 1.05 -6.21 -3.77 1.9 -2.87 -3.05 -1.29 -0.99 -3.33 0.19 -0.81 1.82 -3.78 -2.87 -3.65 -4.21 -2.96 3.0 3.07 -6.24 -5.3 -3.83 -3.93 -3.15 -3.27 - -4.49 -3.44 -3.07 -3.59 -3.31 -3.26 -0.57 -2.13 -1.03 -1.82 2.23 3.39 - - -6.64
LOC_Os02g57310.1 (LOC_Os02g57310)
-1.06 0.62 -1.33 -6.25 -4.89 -1.68 -0.17 -1.09 0.11 -2.11 -0.8 1.41 1.93 2.02 -2.38 -4.7 0.16 0.16 -1.99 1.28 -2.55 -3.06 -2.27 -2.75 -2.31 2.6 2.55 -3.0 -1.9 -2.2 -2.68 -0.96 -2.74 - -5.51 -3.86 -2.54 -2.52 -2.87 -5.22 -2.88 -3.66 -3.77 -0.67 1.57 2.66 0.37 -0.12 -3.33
LOC_Os03g03724.1 (LOC_Os03g03724)
-7.14 -1.32 -4.46 - -6.82 -3.76 -1.55 -1.89 -2.28 -4.62 -1.0 -2.76 2.81 3.23 0.83 0.69 -6.4 -1.84 3.07 0.0 -3.14 -5.4 -3.09 -5.11 -1.97 1.42 3.14 -4.42 -3.59 - -6.93 -2.93 -3.06 -6.6 -6.93 -3.55 -5.31 -3.73 -3.88 -2.71 -4.65 -0.09 -3.42 -3.3 0.77 0.77 - -7.49 -7.4
LOC_Os03g28289.1 (LOC_Os03g28289)
-0.44 -0.14 -1.5 -2.68 -1.45 2.12 -5.35 -1.53 0.26 -0.95 -0.87 2.41 -0.51 1.46 - -0.99 -2.32 0.49 1.72 1.13 -3.03 -2.94 -4.02 1.31 -0.85 2.83 2.03 - - -2.89 -3.05 -1.52 - - -1.92 -2.12 - - - -6.49 -3.32 -3.17 -2.96 -0.01 1.98 1.15 - - -
LOC_Os03g56560.1 (LOC_Os03g56560)
1.61 0.73 -1.55 -5.5 - - - - 0.47 - -3.53 1.69 -2.23 3.45 1.14 1.49 -4.82 -1.37 0.64 1.54 -3.56 0.65 -0.41 0.61 -1.83 1.91 2.37 -1.72 -2.39 - - -2.17 -2.3 -1.61 - - -1.35 - - -2.55 -3.38 -3.59 -1.92 -3.96 0.43 0.45 - - -
LOC_Os04g08788.1 (LOC_Os04g08788)
-0.06 2.6 - - - - - - - - - - - - - - -1.23 - - 1.65 - - - -1.2 - 4.12 4.16 - - - - 1.1 - - - - - - - - -1.45 - - -2.27 - - - - -
LOC_Os04g17500.1 (LOC_Os04g17500)
0.03 -0.27 -0.55 -2.38 -2.05 -1.14 -1.69 -1.35 -1.35 -3.24 -1.05 1.22 -1.42 2.52 1.36 2.41 -1.63 -0.16 -1.4 1.33 -1.31 0.06 -0.11 0.32 -0.1 1.01 2.44 -0.98 -1.86 -0.7 -1.74 -0.57 -1.14 -2.69 -1.23 -1.33 -1.24 -1.16 -1.38 -1.73 -0.79 -1.03 -0.72 -2.14 1.03 0.86 -4.27 -2.8 -3.12
LOC_Os05g30260.1 (LOC_Os05g30260)
-5.15 0.31 - -5.54 - -2.16 -5.41 -4.18 -3.74 - - -0.75 -1.44 -0.49 -1.68 -0.17 - -1.49 - 2.73 -6.66 -3.37 -17.64 -3.23 -10.88 4.52 3.58 - - - - -0.89 - - - - - - - -4.77 -2.56 -3.69 -4.35 0.58 - - - - -
LOC_Os05g39440.1 (LOC_Os05g39440)
-3.3 0.87 -0.93 - - -1.57 - - -0.09 - -5.79 2.1 - -2.62 1.91 3.51 - -0.67 1.61 1.21 - -0.86 -0.99 -4.21 -0.05 1.8 2.18 - - - - -3.15 - - 0.1 - - -1.46 - - -2.08 -2.83 -4.33 - 1.74 2.1 - - -
LOC_Os05g46640.1 (LOC_Os05g46640)
-2.09 0.58 -2.87 -4.1 -0.08 1.12 -7.05 -4.16 -3.89 -4.36 -3.03 -2.09 -5.16 -2.58 - -2.65 -5.06 -1.05 - 2.0 -3.62 -3.45 -4.6 -5.36 - 3.27 3.66 - - -1.65 -3.75 -2.42 - - - - - - - - -5.88 -2.17 -4.07 -5.99 2.78 3.04 -4.12 - -4.22
LOC_Os05g50880.1 (LOC_Os05g50880)
-0.86 3.35 - -2.97 - -2.24 -3.63 - -0.45 -1.73 - 1.51 0.36 -0.46 1.27 - - -2.17 - 2.1 -3.81 - - -2.7 - 3.5 3.44 - - - - 0.41 - - - 0.15 - - - -3.71 -2.75 - - - - - - - -
LOC_Os06g20250.1 (LOC_Os06g20250)
-1.21 2.23 -1.84 0.84 1.38 2.0 - -2.71 1.28 - -2.87 - - 3.39 - - -2.8 -3.61 0.22 1.97 - - - - - 1.85 1.94 - - - - -1.44 - - - - - - - - - - - 2.76 - 1.06 - - -
LOC_Os06g31630.1 (LOC_Os06g31630)
0.93 1.59 -1.47 - -2.12 1.02 -2.24 -5.03 -1.37 -3.19 -0.1 0.71 - 0.28 0.39 2.55 -6.45 -0.33 - 1.63 -3.66 0.13 -3.18 -0.99 -0.27 3.65 2.53 - - -2.72 - -0.74 -3.08 -2.72 - - -0.12 - -2.12 -3.13 -0.87 -2.55 -2.62 -1.84 -2.18 -0.1 -2.06 -3.82 -
LOC_Os06g38410.1 (LOC_Os06g38410)
-1.68 -0.42 -4.5 -5.75 - - - - -2.22 - -2.48 -1.87 - -0.44 -2.29 -0.23 -6.05 -1.83 - 2.55 -4.15 -2.24 -5.06 -1.66 -1.0 4.66 3.36 -0.08 - - - -1.2 - - - - - - -1.41 -4.25 -1.21 -3.32 -2.15 -5.16 - -4.09 - - -
LOC_Os07g01790.1 (LOC_Os07g01790)
0.23 0.66 - - 1.36 - -0.78 - - - -2.58 2.62 - - - - - - - 1.87 - - - - - 3.14 4.44 - - - - - - - - - - - - - - - - - - - 1.33 - -
LOC_Os07g10760.1 (LOC_Os07g10760)
-6.98 -1.48 - -1.9 0.33 0.89 -1.46 - - -4.02 -0.91 2.83 - 3.67 - - -4.01 -6.53 - 1.54 - -4.54 -6.37 0.56 - 3.51 2.94 - - - - -2.87 - - - - - - - -5.69 -5.09 - -6.3 -5.06 - - -0.53 - -
-2.66 -0.36 - -4.74 -4.32 - -2.71 0.16 -4.47 -5.17 -4.49 -1.02 -3.05 -1.04 - - - -4.45 - 1.85 1.54 -0.93 -1.45 -4.9 1.08 1.55 3.3 -0.6 1.99 -1.73 0.41 1.67 -1.67 -2.31 0.36 1.87 1.11 0.73 0.6 -1.81 -2.56 -0.2 -1.41 -0.58 -0.96 - - - -
LOC_Os07g32129.1 (LOC_Os07g32129)
-2.7 -1.81 1.68 -2.83 -4.35 -0.08 -2.13 -2.97 -4.15 -3.33 -0.6 -3.68 - - - - 0.0 -1.2 - 2.53 0.49 -5.58 -2.01 -5.52 - 2.54 1.98 0.86 0.22 -0.09 1.02 1.0 0.59 -0.05 0.19 0.23 0.76 0.11 0.44 0.41 0.71 0.7 1.24 - - -1.19 - - -
LOC_Os08g13300.1 (LOC_Os08g13300)
0.36 1.39 -2.44 -1.29 -1.58 -2.0 -2.73 -4.17 -2.73 -4.74 -2.89 - 0.36 -0.66 - 1.84 -2.4 -1.55 3.21 1.86 - -3.38 -4.71 -2.22 - 3.72 3.23 - - - - -2.78 - - - - - - - - -4.5 - -3.18 -3.18 -0.69 -2.69 - -3.13 -1.91
LOC_Os08g33840.1 (LOC_Os08g33840)
1.03 1.74 - - - 0.91 - -4.21 - - -3.59 1.72 - -1.81 - 1.66 - 1.18 - 2.21 - - - -2.82 - 1.7 3.24 - - - - -0.82 - - - -0.02 - -0.47 - - - -3.74 - -5.28 2.86 2.45 - - -
-3.79 -1.51 - - - - -4.29 -3.4 -4.0 -3.53 -0.3 - 0.13 2.0 0.87 0.67 -3.65 -1.98 4.1 0.88 - -5.23 - -7.06 0.53 0.8 2.82 - - - - - - - - - - - - -6.8 - - - -2.88 2.42 1.89 -2.27 - -
LOC_Os09g06690.1 (LOC_Os09g06690)
- 0.68 - - 1.42 - -0.73 0.95 - - -2.16 2.67 - - - - - - - 1.93 - - - - - 3.2 4.5 - - - - - - - - - - - - - - - - - - - - - -
LOC_Os09g06950.1 (LOC_Os09g06950)
-7.34 -3.82 -8.94 - -0.27 - - - - -1.28 0.38 -7.19 - 4.25 - - - - - 2.41 -5.81 -8.07 -9.44 -7.97 - 2.81 3.89 - - - -5.9 -5.95 - -5.1 - - - -5.1 - -6.79 -7.83 -7.17 - - - - - - -
LOC_Os09g08240.1 (LOC_Os09g08240)
-0.15 1.77 -1.96 - -1.64 1.04 -2.37 -1.37 0.3 -3.2 -1.54 1.18 -0.28 2.71 1.19 1.52 -3.83 -1.43 - 1.92 -1.37 -0.83 -2.51 0.61 -0.77 2.4 2.57 -1.96 -1.39 -0.98 -2.24 -1.96 - - - -1.99 -2.05 -1.44 - -0.8 -0.85 -0.12 -0.45 -2.74 -0.5 -2.6 - - -
LOC_Os09g12060.1 (LOC_Os09g12060)
-0.03 0.23 -1.57 -4.17 -1.95 -1.33 -0.24 -0.22 0.83 0.08 -0.42 0.86 0.18 0.9 -0.6 -0.63 -0.1 -0.15 -0.93 1.65 -2.1 -2.23 -2.3 -2.11 -1.04 2.73 3.41 -2.76 -2.56 -1.31 -1.33 -0.98 -2.7 -2.34 -2.0 -1.7 -2.92 -2.37 -2.78 -3.21 -2.17 -2.51 -1.93 -0.48 0.45 0.56 -0.09 0.34 -0.47
LOC_Os09g12580.1 (LOC_Os09g12580)
-2.24 1.71 -2.6 1.91 0.15 -1.13 -4.02 - - - - - -2.13 - - - - -3.89 - 1.65 - -4.45 - - - 2.92 4.84 - - - - -2.71 - - - - - - - - - - - -5.09 - - - - -
LOC_Os09g15060.1 (LOC_Os09g15060)
-1.7 1.54 - -3.36 -1.66 2.03 - -4.23 1.13 - -3.7 -1.21 0.86 0.0 - - -3.46 -3.02 - 1.68 -4.65 -3.51 -4.92 -4.23 - 2.64 4.57 - - - - -0.93 - - - - - - -1.2 - -2.73 -2.65 -1.7 -2.82 - - - - -1.41
LOC_Os09g17010.1 (LOC_Os09g17010)
- -0.43 - - -1.65 - - - -3.44 - - - - -4.28 - - - -5.66 - 2.92 - - - - - 3.68 4.77 - - - - - - - - - - - - - - - - -3.38 - - - - -
LOC_Os10g01030.1 (LOC_Os10g01030)
1.18 0.39 -5.08 -4.72 - - - -6.68 -0.81 - -4.74 2.48 -4.8 -4.85 1.13 0.27 - 0.95 -0.62 1.68 -3.84 0.07 0.13 -4.88 0.14 2.11 2.96 - - - - -4.39 - - - -3.5 - -2.95 - -6.56 -1.64 -4.82 -4.25 - 2.6 2.95 - - -
LOC_Os10g06910.1 (LOC_Os10g06910)
-3.2 2.18 -4.7 -3.89 1.87 -0.01 - - -0.07 - -6.82 -3.91 -1.03 - - - -2.79 -5.5 - 1.16 - - - -2.56 - 4.26 4.01 - - - - -2.26 - - - - - - - - - - - - - - - - -
LOC_Os10g10750.1 (LOC_Os10g10750)
-6.51 -4.41 0.85 -4.25 -4.06 - - - - - -0.54 -0.34 -4.93 3.23 - - -1.79 3.13 - 2.43 - - - - - 3.17 3.53 - - - - - - - - - - - - -4.8 - -1.6 -1.64 - -4.45 -1.22 - - -
LOC_Os10g11590.1 (LOC_Os10g11590)
-7.1 -3.97 -0.42 -2.86 -3.99 - - - - - -3.35 -0.83 -6.53 3.71 - - -2.07 2.0 - 2.68 - - - - - 3.38 3.6 - - - - - - - - - - - - -5.75 - -1.26 -2.33 - - -1.55 - - -
LOC_Os10g18480.1 (LOC_Os10g18480)
-5.49 -1.22 -7.16 -6.59 -5.17 - -3.94 -4.83 -4.27 -8.63 -3.81 -0.34 -0.23 0.61 -0.66 - -6.27 0.09 - 2.49 -5.55 -1.4 -4.97 -1.4 3.48 2.27 4.28 - -4.67 - - - - - - -5.23 - - - -7.61 -6.41 -8.18 -8.0 0.21 -1.75 -4.46 - - -
LOC_Os10g18490.1 (LOC_Os10g18490)
-3.88 0.63 -4.32 -2.93 -6.06 -1.79 -3.26 -1.36 -4.99 -4.0 -2.85 -4.96 0.35 1.38 -1.07 -4.16 -8.15 -1.62 - 2.38 -5.63 -0.61 -5.76 -0.99 2.7 1.88 4.28 -5.34 - -5.09 -4.61 - -5.09 -4.81 - -5.36 - -5.57 - -5.44 -5.92 -5.9 -7.09 2.32 -3.41 -6.4 - - -
LOC_Os10g19120.1 (LOC_Os10g19120)
-2.56 -1.69 -6.73 -5.92 - -5.35 - -7.29 -1.25 -7.75 -4.69 -1.17 -5.13 -5.68 -0.08 -0.71 - -1.29 - 2.69 -7.57 -3.99 -4.7 -5.96 -1.61 4.5 3.93 - - - - -3.32 - - - - - - - -7.86 -2.05 -6.0 -5.1 -8.4 -1.78 -3.5 - - -
LOC_Os10g23260.1 (LOC_Os10g23260)
-4.5 2.08 - - - - - - -0.28 - -3.22 - - 3.63 - - - -3.22 - 2.18 - - - -1.91 - 1.1 3.62 - - - - - - - - - - - - - - - - - 1.78 3.1 - - -
LOC_Os11g01310.1 (LOC_Os11g01310)
-3.48 -1.04 - -4.25 -1.36 1.39 -1.31 -1.81 -2.86 -2.79 -1.92 -0.74 2.22 3.1 -0.92 -0.33 - -1.89 - 2.22 -2.77 -4.2 -1.04 -4.21 -0.87 2.79 3.68 -1.83 -2.48 -2.07 -1.62 - - - - - -0.7 -2.29 -2.53 -3.87 -3.64 -2.63 -2.94 -1.21 - - - - -3.45
LOC_Os11g05250.1 (LOC_Os11g05250)
0.92 -0.74 -0.9 - - -1.57 0.27 -0.02 -1.25 -0.73 -2.79 1.72 1.36 0.94 0.7 -0.02 -2.64 0.71 1.1 2.15 -6.81 -0.33 -0.85 -4.2 -1.13 1.92 2.85 - - - - -1.76 - - - -1.76 - -1.23 - -5.51 -3.95 -3.45 -4.31 -0.41 2.29 1.53 -1.0 -1.75 -3.15
LOC_Os11g33440.1 (LOC_Os11g33440)
-0.86 0.99 -0.5 -5.0 -4.63 0.54 0.08 0.15 -1.17 -2.87 -0.96 -2.33 -3.16 -1.35 3.04 2.82 1.39 1.41 - 0.74 -2.36 -8.09 -2.37 -3.52 -1.61 2.0 2.33 -2.34 -4.26 -1.93 -3.3 -3.83 -2.58 -3.18 -2.97 -2.36 -2.58 -2.17 -4.0 -4.41 -2.47 -2.77 -2.08 0.18 -3.01 -2.47 0.66 0.8 0.05
LOC_Os11g33942.1 (LOC_Os11g33942)
-5.74 -2.38 -3.83 - -6.34 - - - - -7.53 -2.95 -0.25 2.41 0.78 3.03 2.64 - -2.29 - 0.59 -1.0 - -1.86 -7.29 -1.79 2.53 3.04 -1.95 -2.3 -0.02 -2.99 -1.85 -1.34 -1.32 - -1.77 -4.16 -2.07 -1.16 -2.2 0.01 -0.56 0.36 -0.92 -0.21 0.36 - - -
LOC_Os11g44050.1 (LOC_Os11g44050)
1.15 1.29 -3.87 - - - - - -1.55 - -4.32 2.51 - -1.82 - 0.83 - -3.09 - 2.08 - 0.22 -1.68 -0.97 - 4.09 3.5 - - - - -0.63 - - - - - - - - -2.23 - -3.9 - -0.9 - - - -
LOC_Os12g14200.1 (LOC_Os12g14200)
0.27 3.0 -2.48 - - 1.76 -4.03 -2.83 -1.32 -1.9 -7.12 -1.81 0.09 -2.01 - 2.17 - -2.8 - 2.13 -2.55 -4.64 -4.36 -0.71 - 3.47 3.23 - - - -4.9 -0.77 - - - - - - - -0.95 -0.31 -4.77 -0.68 -1.71 - -0.93 - - -
LOC_Os12g22230.1 (LOC_Os12g22230)
-1.35 2.67 -4.29 - - - - - -1.44 - - -0.9 -0.62 -0.74 - - - -4.15 - 2.29 -2.97 -1.43 -2.03 0.6 - 3.71 4.13 - - - - -2.3 - - - - - -0.86 -1.56 -3.7 -1.76 -1.38 -1.24 - - - - - -
LOC_Os12g29780.1 (LOC_Os12g29780)
-2.9 -0.91 -0.66 - - - - - 0.28 - -6.26 1.8 -0.71 -1.32 3.66 1.57 - -2.02 3.19 -0.79 -3.24 0.43 0.43 -5.65 -0.47 1.1 2.24 - - - -1.93 -3.57 - - - - - - - -4.18 -1.01 -2.92 - -3.73 1.33 1.26 - - -
LOC_Os12g31180.1 (LOC_Os12g31180)
-1.14 0.16 -1.87 - -3.64 - -1.2 -2.95 -2.24 -2.7 -2.93 0.44 -0.23 0.86 0.25 1.69 -4.33 -1.4 0.07 1.66 -1.68 -3.88 -2.37 -1.14 -1.49 3.13 2.8 - 0.92 -2.48 -2.55 -18.6 1.12 -0.07 - - -1.59 2.24 - -0.84 -0.45 -0.53 0.2 -2.84 0.53 -0.56 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.