LOC_Os08g13140.1 (LOC_Os08g13140)


Aliases : LOC_Os08g13140

Description : no hits & (original description: none)


Gene families : OG0002197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g13140.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g20510.1 LOC_Os02g20510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g30390.1 LOC_Os03g30390 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os05g28430.1 LOC_Os05g28430 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os05g35090.1 LOC_Os05g35090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21040.1 LOC_Os06g21040 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g21300.1 LOC_Os06g21300 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g17210.1 LOC_Os08g17210 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os08g26930.1 LOC_Os08g26930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g20060.1 LOC_Os09g20060 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g07000.1 LOC_Os10g07000 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os11g26100.1 LOC_Os11g26100 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!