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  5. LOC_Os08g12800.1

LOC_Os08g12800.1 (LOC_Os08g12800)


Aliases : LOC_Os08g12800

Description : Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana (sp|q9m088|e135_arath : 551.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 273.8)


Gene families : OG0000517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12800.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00072670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.01 OrthoFinder output from all 47 species
AT3G24330 No alias O-Glycosyl hydrolases family 17 protein 0.06 OrthoFinder output from all 47 species
AT4G31140 No alias O-Glycosyl hydrolases family 17 protein 0.05 OrthoFinder output from all 47 species
AT5G20870 No alias O-Glycosyl hydrolases family 17 protein 0.02 OrthoFinder output from all 47 species
Als_g25643 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058239 No alias EC_3.2 glycosylase & original description: CDS=1-1545 0.02 OrthoFinder output from all 47 species
Dcu_g41709 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04624 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01014995001 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os11g36940.1 LOC_Os11g36940 Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Len_g05214 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22735 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g08862 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
MA_10437110g0020 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Msp_g09175 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14474 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12545 No alias EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g15450 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001199 No alias EC_3.2 glycosylase & original description: CDS=110-1558 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015618 No alias EC_3.2 glycosylase & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Solyc07g017730.3.1 Solyc07g017730 Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Tin_g06571 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021574_P001 Zm00001e021574 Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 29 345
IPR012946 X8 373 443
No external refs found!