1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g12760.1

LOC_Os08g12760.1 (ECT5, LOC_Os08g12760)


Aliases : ECT5, LOC_Os08g12760

Description : methylation reader (ECT)


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12760.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00196240 ECT8,... No description available 0.06 OrthoFinder output from all 47 species
Adi_g108043 ECT5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47637 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10945 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27732.t2 ECT5, Aspi01Gene27732 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001103 ECT5 methylation reader *(ECT) & original description: CDS=1-2025 0.06 OrthoFinder output from all 47 species
Ceric.38G048900.1 ECT8, Ceric.38G048900 methylation reader *(ECT) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.38G056000.1 ECT8, Ceric.38G056000 methylation reader *(ECT) & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000806.40 ECT8 No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09605 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20647 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029460001 ECT5 No description available 0.03 OrthoFinder output from all 47 species
Gb_38284 ECT5 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Len_g26570 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g00140.1 ECT5 methylation reader (ECT) 0.02 OrthoFinder output from all 47 species
Pir_g00634 ECT2 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16704 ECT5 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003691 ECT8 methylation reader *(ECT) & original description: CDS=367-2349 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006035 ECT8 methylation reader *(ECT) & original description: CDS=18-1823 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012931 ECT6 methylation reader *(ECT) & original description: CDS=1-1896 0.03 OrthoFinder output from all 47 species
Sam_g35979 No alias methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41432 ECT6 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 337 474
No external refs found!