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  5. LOC_Os08g12680.1

LOC_Os08g12680.1 (EMB1135, LOC_Os08g12680)


Aliases : EMB1135, LOC_Os08g12680

Description : Protein FORGETTER 1 OS=Arabidopsis thaliana (sp|f4if36|fgt1_arath : 746.0)


Gene families : OG0002623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g12680.1

Target Alias Description ECC score Gene Family Method Actions
AT1G79350 EMB1135 RING/FYVE/PHD zinc finger superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g021474 EMB1135 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16049 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08125 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g10929 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64789.t1 EMB1135, Aspi01Gene64789 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64793.t1 EMB1135, Aspi01Gene64793 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G084500.1 EMB1135, Ceric.12G084500 not classified & original description: pacid=50601600... 0.03 OrthoFinder output from all 47 species
Cre01.g053250 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre02.g095045 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre13.g578501 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g13353 EMB1135 not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01036703001 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_10955 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_10957 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g16816 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g14790.1 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Msp_g05644 EMB1135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g005490.4.1 EMB1135, Solyc10g005490 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Spa_g10872 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040038_P001 EMB1135, Zm00001e040038 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e041616_P001 EMB1135, Zm00001e041616 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR039187 SNO_AAA 235 563
IPR026937 SBNO_Helicase_C_dom 1060 1234
No external refs found!