- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os08g05890
Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface
Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G45140 | PVA12 | plant VAP homolog 12 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g085923 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102804 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03680 | PVA12 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g01516 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03941 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g02457 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05745 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27802 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g32115 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.39G059000.1 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.06 | OrthoFinder output from all 47 species | |
| Cre03.g196900 | VAP27, VAP27-1,... | Vesicle-associated protein 1-1 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g04468 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06823 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15356 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03669 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g04340.1 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03861 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g10884 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06542 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g35479 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g05839 | VAP27, VAP27-1,... | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0129.g021931 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18031 | No alias | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g090990.3.1 | Solyc01g090990 | contact site protein (VAP27) of... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06544 | PVA12 | contact site protein (VAP27) of... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47036 | PVA12 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040240_P001 | Zm00001e040240 | contact site protein (VAP27) of... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000139 | Golgi membrane | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005338 | nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0015165 | pyrimidine nucleotide-sugar transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015780 | nucleotide-sugar transmembrane transport | IEP | HCCA |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | HCCA |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0090481 | pyrimidine nucleotide-sugar transmembrane transport | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000535 | MSP_dom | 6 | 109 |
| No external refs found! |