LOC_Os08g04560.1 (LOC_Os08g04560)

Aliases : LOC_Os08g04560

Description : aromatic L-amino acid decarboxylase

Gene families : OG0003989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003989_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os08g04560.1
Cluster	HCCA: Cluster_197

Target	Alias	Description	ECC score	Gene Family Method
Gb_10830	No alias	aromatic L-amino acid decarboxylase	0.05	OrthoFinder output from all 47 species
LOC_Os05g43510.1	LOC_Os05g43510	aromatic L-amino acid decarboxylase	0.03	OrthoFinder output from all 47 species
LOC_Os10g23900.1	LOC_Os10g23900	aromatic L-amino acid decarboxylase	0.04	OrthoFinder output from all 47 species
Mp7g06530.1	No alias	aromatic L-amino acid decarboxylase	0.02	OrthoFinder output from all 47 species
Pir_g46804	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Smo121532	No alias	Secondary metabolism.nitrogen-containing secondary...	0.03	OrthoFinder output from all 47 species
Smo78872	No alias	Secondary metabolism.nitrogen-containing secondary...	0.01	OrthoFinder output from all 47 species
Zm00001e000634_P001	Zm00001e000634	aromatic L-amino acid decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	59	441

External Links

No external refs found!