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  5. LOC_Os08g03570.1

LOC_Os08g03570.1 (MUR4, UXE1, HSR8,...)


Aliases : MUR4, UXE1, HSR8, LOC_Os08g03570

Description : UDP-D-xylose 4-epimerase


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03570.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00131820 UGE5,... Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
AT1G30620 MUR4, UXE1, HSR8 NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G10960 UGE5 UDP-D-glucose/UDP-D-galactose 4-epimerase 5 0.02 OrthoFinder output from all 47 species
Adi_g013727 ATUGE1, UGE1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104176 REB1, UGE4, RHD1 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01852 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31722 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23535 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35618 No alias EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40011.t1 MUR4, UXE1,... EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0246.g060024 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: CDS=191-1201 0.04 OrthoFinder output from all 47 species
Cba_g29614 MUR4, UXE1, HSR8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78315 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G017400.1 UGE5, Ceric.26G017400 EC_5.1 racemase or epimerase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g28825 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01226 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57619 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428611g0010 ATUGE1, UGE1 UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
MA_113087g0010 REB1, UGE4, RHD1 UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis... 0.02 OrthoFinder output from all 47 species
Mp1g16010.1 No alias UDP-D-xylose 4-epimerase 0.02 OrthoFinder output from all 47 species
Msp_g08359 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g02234 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02105 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14441 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14369 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44423 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 67 383
No external refs found!