1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os08g03410.1

LOC_Os08g03410.1 (CRU1, CRA1, ATCRA1,...)


Aliases : CRU1, CRA1, ATCRA1, LOC_Os08g03410

Description : no description available(sp|a0a222nnm9|cos1_cocnu : 326.0)


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03410.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00026720 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.03 OrthoFinder output from all 47 species
AMTR_s00067p00027690 evm_27.TU.AmTr_v1... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.02 OrthoFinder output from all 47 species
AT1G07750 No alias RmlC-like cupins superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g15564 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26224 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Aop_g29046 CRU3, CRC Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Aop_g67915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70635 No alias Globulin-type seed storage protein *(CR) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15952.t1 Aspi01Gene15952 Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15953.t1 Aspi01Gene15953 Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene34023.t1 Aspi01Gene34023 Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011190 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0010.g012318 No alias Globulin-type seed storage protein & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Dde_g05793 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19386 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01022907001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01022914001 No alias Glutelin type-A 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.02 OrthoFinder output from all 47 species
GSVIVT01030613001 No alias Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.06 OrthoFinder output from all 47 species
Gb_01530 CRU2, CRB no description available(sp|a0a222nnm9|cos1_cocnu : 359.0) 0.03 OrthoFinder output from all 47 species
Gb_12801 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 216.0) 0.03 OrthoFinder output from all 47 species
Gb_18954 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 172.0) 0.03 OrthoFinder output from all 47 species
Gb_26254 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26733 No alias no description available(sp|a0a222nnm9|cos1_cocnu : 139.0) 0.03 OrthoFinder output from all 47 species
Gb_30214 CRU1, CRA1, ATCRA1 no description available(sp|a0a1l6k371|jugn4_jugni : 301.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02520.1 LOC_Os05g02520 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g37967.1 LOC_Os09g37967 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g25699 CRU2, CRB not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_467g0010 No alias no description available(sp|q2tpw5|jugr4_jugre : 99.8) 0.03 OrthoFinder output from all 47 species
MA_5751448g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_67677g0010 No alias no description available(sp|q2tpw5|jugr4_jugre : 254.0) 0.03 OrthoFinder output from all 47 species
MA_8424978g0010 CRU3, CRC no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g18470.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g15802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43224 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Ore_g43844 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pir_g09527 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25952 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g27212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo87987 No alias Legumin B OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
Solyc01g094110.3.1 Solyc01g094110 13S globulin seed storage protein 2 OS=Fagopyrum... 0.05 OrthoFinder output from all 47 species
Solyc03g005580.2.1 CRU1, CRA1,... no description available(sp|a0a1l6k371|jugn4_jugni : 439.0) 0.03 OrthoFinder output from all 47 species
Solyc09g025210.3.1 CRU1, CRA1,... no description available(sp|q2tpw5|jugr4_jugre : 424.0) 0.05 OrthoFinder output from all 47 species
Solyc09g072560.4.1 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.05 OrthoFinder output from all 47 species
Solyc09g090150.4.1 CRU2, CRB, Solyc09g090150 no description available(sp|a0a1l6k371|jugn4_jugni : 418.0) 0.05 OrthoFinder output from all 47 species
Spa_g43375 No alias Globulin-type seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49552 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e017768_P001 Zm00001e017768 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e038826_P001 Zm00001e038826 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0045735 nutrient reservoir activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 347 491
IPR006045 Cupin_1 48 233
No external refs found!