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  5. LOC_Os08g03380.1

LOC_Os08g03380.1 (CJD1, LOC_Os08g03380)


Aliases : CJD1, LOC_Os08g03380

Description : no hits & (original description: none)


Gene families : OG0006135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g03380.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
Adi_g010745 CJD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29829 CJD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033920 CJD1 not classified & original description: CDS=215-1048 0.04 OrthoFinder output from all 47 species
Cba_g33849 CJD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g171100 No alias No description available 0.01 OrthoFinder output from all 47 species
Mp1g07970.1 CJD1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g009940.4.1 CJD1, Solyc04g009940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e021804_P002 CJD1, Zm00001e021804 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029262_P001 CJD1, Zm00001e029262 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021788 CPP1-like 85 186
No external refs found!