LOC_Os08g02350.1 (LOC_Os08g02350)


Aliases : LOC_Os08g02350

Description : no hits & (original description: none)


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os08g02350.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00036460 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT5G24740 No alias Protein of unknown function (DUF1162) 0.03 OrthoFinder output from all 47 species
Adi_g011972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066851 No alias not classified & original description: CDS=121-8928 0.04 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.51 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.50 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre17.g727600 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09937 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01019369001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01019371001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g02354.1 LOC_Os08g02354 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10435329g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_12699g0020 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_174037g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023047 No alias not classified & original description: CDS=181-6594 0.03 OrthoFinder output from all 47 species
Sam_g17461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.05 OrthoFinder output from all 47 species
Tin_g09937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029198_P001 Zm00001e029198 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029204_P001 Zm00001e029204 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 1707 1957
IPR031645 VPS13_DH-like 2269 2443
No external refs found!