- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LOC_Os07g46920
Description : Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia (sp|q94kl7|sild_forin : 210.0)
Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os07g46920.1 | |
| Cluster | HCCA: Cluster_57 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00190670 | evm_27.TU.AmTr_v1... | Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00244080 | evm_27.TU.AmTr_v1... | Tropinone reductase-like 1 OS=Erythroxylum coca | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00030p00244570 | SRE1, SIS4,... | Secoisolariciresinol dehydrogenase (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G47140 | No alias | NAD(P)-binding Rossmann-fold superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G26770 | No alias | NAD(P)-binding Rossmann-fold superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G42960 | ATA1, TA1, ASD | TAPETUM 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT3G51680 | No alias | NAD(P)-binding Rossmann-fold superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g04498 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g36600 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14817 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g33222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g25619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g33270 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08419 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g27057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene54448.t1 | Aspi01Gene54448 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71695.t1 | Aspi01Gene71695 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71697.t1 | Aspi01Gene71697 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71700.t1 | Aspi01Gene71700 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71705.t1 | Aspi01Gene71705 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G025200.1 | Ceric.09G025200 | not classified & original description: pacid=50587016... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G054700.1 | Ceric.17G054700 | not classified & original description: pacid=50617562... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g00544 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07412 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g37440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g38597 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g12998 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g48506 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008068001 | No alias | (-)-isopiperitenol/(-)-carveol dehydrogenase,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008069001 | No alias | Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024621001 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028200001 | No alias | Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033911001 | No alias | Tropinone reductase-like 1 OS=Erythroxylum coca | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033913001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01033916001 | SRE1, SIS4,... | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036069001 | No alias | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05035 | No alias | Secoisolariciresinol dehydrogenase (Fragment)... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05036 | No alias | Secoisolariciresinol dehydrogenase (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_07560 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07561 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16803 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19302 | No alias | Short-chain dehydrogenase reductase 3b OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25236 | No alias | Momilactone A synthase OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30884 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32313 | No alias | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_36105 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40683 | ATA1, TA1, ASD | Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g10000.1 | SRE1, SIS4,... | Momilactone A synthase OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g10010.1 | SRE1, SIS4,... | Momilactone A synthase OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g46840.1 | LOC_Os07g46840 | Tropinone reductase-like 2 OS=Erythroxylum coca... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46910.1 | LOC_Os07g46910 | Tropinone reductase-like 2 OS=Erythroxylum coca... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46950.2 | LOC_Os07g46950 | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30853 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g42773 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g48178 | SRE1, SIS4,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g54990 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10120560g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_107740g0010 | ATA1, TA1, ASD | Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_109050g0010 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_112182g0010 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_115790g0020 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_14140g0010 | No alias | Zerumbone synthase OS=Zingiber zerumbet... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8197627g0010 | No alias | Zerumbone synthase OS=Zingiber zerumbet... | 0.03 | OrthoFinder output from all 47 species | |
| MA_97011g0010 | No alias | Short-chain dehydrogenase reductase 2a OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g09710.1 | No alias | Short-chain dehydrogenase reductase 3a OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Mp3g24680.1 | No alias | Momilactone A synthase OS=Oryza sativa subsp. japonica... | 0.05 | OrthoFinder output from all 47 species | |
| Mp3g24710.1 | No alias | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g02670.1 | No alias | Zerumbone synthase OS=Zingiber zerumbet... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28863 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g22148 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g43098 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21644 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g50431 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g12517 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003562 | No alias | not classified & original description: CDS=1-426 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0143.g022913 | No alias | not classified & original description: CDS=1-867 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0221.g026191 | No alias | not classified & original description: CDS=1-561 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g005500.3.1 | SRE1, SIS4,... | Secoisolariciresinol dehydrogenase (Fragment)... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g018600.1.1 | ATA1, TA1, ASD,... | Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g056610.3.1 | SRE1, SIS4,... | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g056700.2.1 | Solyc12g056700 | Secoisolariciresinol dehydrogenase (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g056710.3.1 | SRE1, SIS4,... | Secoisolariciresinol dehydrogenase (Fragment)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008424_P001 | SRE1, SIS4,... | Momilactone A synthase OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035437_P002 | Zm00001e035437 | Secoisolariciresinol dehydrogenase (Fragment)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038385_P001 | Zm00001e038385 | Sex determination protein tasselseed-2 OS=Zea mays... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015297 | antiporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |