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  5. LOC_Os07g46330.1

LOC_Os07g46330.1 (LOC_Os07g46330)


Aliases : LOC_Os07g46330

Description : no hits & (original description: none)


Gene families : OG0001387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g46330.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00263350 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT5G13720 No alias Uncharacterised protein family (UPF0114) 0.04 OrthoFinder output from all 47 species
Adi_g002396 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g01211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12087 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04037 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52268 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g04097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08407.t1 Aspi01Gene08407 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61128.t1 Aspi01Gene61128 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61131.t1 Aspi01Gene61131 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0254.g060418 No alias not classified & original description: CDS=120-1037 0.01 OrthoFinder output from all 47 species
Cba_g03052 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g25206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z152400.1 Ceric.1Z152400 not classified & original description: pacid=50598814... 0.05 OrthoFinder output from all 47 species
Ceric.33G021000.1 Ceric.33G021000 not classified & original description: pacid=50606854... 0.02 OrthoFinder output from all 47 species
Dcu_g00963 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032192001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g00521 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g28303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426721g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_184655g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g10020.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08076 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g58180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006077 No alias not classified & original description: CDS=777-1349 0.03 OrthoFinder output from all 47 species
Sam_g06932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010892_P001 Zm00001e010892 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005134 UPF0114 103 241
No external refs found!