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  5. LOC_Os07g45064.1

LOC_Os07g45064.1 (LOC_Os07g45064)


Aliases : LOC_Os07g45064

Description : component TRA1 of SAGA transcription co-activator complex. protein kinase (PIKK)


Gene families : OG0002090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002090_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g45064.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00268p00016240 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.atypical kinase... 0.03 OrthoFinder output from all 47 species
AMTR_s03799p00000720 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G17930 No alias Phosphatidylinositol 3- and 4-kinase family protein with... 0.08 OrthoFinder output from all 47 species
AT4G36080 No alias phosphotransferases, alcohol group as... 0.08 OrthoFinder output from all 47 species
Adi_g012013 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Aev_g05547 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ala_g11954 No alias component *(TRA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Als_g07336 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Aob_g32646 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23771.t1 Aspi01Gene23771 component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Azfi_s0051.g031225 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Cba_g06599 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.67 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021537.68 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre02.g088750 No alias Protein modification.phosphorylation.atypical kinase... 0.04 OrthoFinder output from all 47 species
Dac_g07813 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Dcu_g03224 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Ehy_g01717 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
GSVIVT01018783001 No alias Protein modification.phosphorylation.atypical kinase... 0.08 OrthoFinder output from all 47 species
LOC_Os07g45074.1 LOC_Os07g45074 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g40192 No alias component *(TRA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Lfl_g36110 No alias component *(TRA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
MA_10427352g0010 No alias component TRA1 of SAGA transcription co-activator complex 0.06 OrthoFinder output from all 47 species
MA_10427352g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_3337g0010 No alias protein kinase (PIKK) 0.04 OrthoFinder output from all 47 species
Mp5g23620.1 No alias component TRA1 of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Msp_g31775 No alias component *(TRA1) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Nbi_g03878 No alias component *(TRA1) of SAGA transcription co-activator... 0.06 OrthoFinder output from all 47 species
Ore_g38151 No alias component *(TRA1) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Ppi_g39737 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sam_g50512 No alias component *(TRA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Solyc02g083780.3.1 Solyc02g083780 protein kinase (PIKK) 0.06 OrthoFinder output from all 47 species
Solyc02g083900.3.1 Solyc02g083900 component TRA1 of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Zm00001e035713_P005 Zm00001e035713 component TRA1 of SAGA transcription co-activator... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017070 U6 snRNA binding IEP HCCA
MF GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0030623 U5 snRNA binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003152 FATC_dom 1103 1134
IPR000403 PI3/4_kinase_cat_dom 801 1047
IPR003151 PIK-rel_kinase_FAT 50 390
No external refs found!