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  5. LOC_Os07g43730.1

LOC_Os07g43730.1 (LOC_Os07g43730)


Aliases : LOC_Os07g43730

Description : Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica (sp|q8lhp0|elof1_orysj : 94.0)


Gene families : OG0004393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g43730.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
Cre17.g702550 No alias No description available 0.02 OrthoFinder output from all 47 species
Mp2g21400.1 No alias Transcription elongation factor 1 homolog OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc10g008870.3.1 Solyc10g008870 Transcription elongation factor 1 homolog OS=Oryza... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP HCCA
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR007808 Elf1 2 62
No external refs found!