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Aliases : LOC_Os07g42750
Description : Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana (sp|f4jrf5|rlt3_arath : 169.0)
Gene families : OG0001590 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001590_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G12750 | No alias | Homeodomain-like transcriptional regulator | 0.04 | OrthoFinder output from all 47 species | |
| AT5G44180 | No alias | Homeodomain-like transcriptional regulator | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g17892 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g09051 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10630 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g05343 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11293 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Cre03.g174500 | No alias | Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g48258 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00993 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21530 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16445 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g30736 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020605001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036776001 | No alias | Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09041 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| MA_2434g0010 | No alias | HOX-like transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g47810 | HB-1 | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29882 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g65963 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0025.g009354 | No alias | component *(RINGLET/RLT) of ISWI chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g077660.3.1 | HB-1, Solyc02g077660 | HOX-like transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g053610.3.1 | Solyc07g053610 | HOX-like transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g006200.2.1 | Solyc11g006200 | Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e020198_P001 | HB-1, Zm00001e020198 | HOX-like transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028032_P001 | Zm00001e028032 | HOX-like transcription factor | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018501 | DDT_dom | 269 | 321 |
| No external refs found! |