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  5. LOC_Os07g42490.1

LOC_Os07g42490.1 (ATSUS4, SUS4, LOC_Os07g42490)


Aliases : ATSUS4, SUS4, LOC_Os07g42490

Description : sucrose synthase


Gene families : OG0001258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42490.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT5G20830 ASUS1, atsus1, SUS1 sucrose synthase 1 0.03 OrthoFinder output from all 47 species
AT5G49190 SSA, ATSUS2, SUS2 sucrose synthase 2 0.02 OrthoFinder output from all 47 species
Azfi_s0638.g080509 SSA, ATSUS2, SUS2 EC_2.4 glycosyltransferase & original description: CDS=349-2793 0.03 OrthoFinder output from all 47 species
Ceric.13G059900.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G005600.1 ATSUS3, SUS3,... EC_2.4 glycosyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g09430 ATSUS3, SUS3 sucrose synthase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015018001 ATSUS4, SUS4 Carbohydrate metabolism.sucrose... 0.02 OrthoFinder output from all 47 species
GSVIVT01035106001 SSA, ATSUS2, SUS2 Carbohydrate metabolism.sucrose... 0.04 OrthoFinder output from all 47 species
MA_10430807g0030 ATSUS3, SUS3 sucrose synthase 0.02 OrthoFinder output from all 47 species
Mp2g16060.1 ATSUS3, SUS3 sucrose synthase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008018 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: CDS=272-2773 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013407 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: CDS=27-2423 0.03 OrthoFinder output from all 47 species
Sam_g15885 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g042520.4.1 ASUS1, atsus1,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Solyc07g042550.3.1 ATSUS4, SUS4,... sucrose synthase 0.02 OrthoFinder output from all 47 species
Solyc12g009300.3.1 ATSUS4, SUS4,... sucrose synthase 0.03 OrthoFinder output from all 47 species
Spa_g15194 ATSUS3, SUS3 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005985 sucrose metabolic process IEA Interproscan
MF GO:0016157 sucrose synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 563 745
IPR000368 Sucrose_synth 12 558
No external refs found!