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  5. LOC_Os07g42250.1

LOC_Os07g42250.1 (ATSSL4, SSL4, LOC_Os07g42250)


Aliases : ATSSL4, SSL4, LOC_Os07g42250

Description : Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana (sp|q9sd07|ssl4_arath : 177.0) & Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen lyase(50.4.3 : 110.4)


Gene families : OG0001226 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001226_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g42250.1

Target Alias Description ECC score Gene Family Method Actions
AT3G51430 SSL5, YLS2 Calcium-dependent phosphotriesterase superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g03050 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12182 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49250.t1 ATSSL4, SSL4,... EC_4.3 carbon-nitrogen lyase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g10263 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19369 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003820001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01015058001 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_02716 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_908014g0010 ATSSL4, SSL4 Protein STRICTOSIDINE SYNTHASE-LIKE 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g10106 SSL5, YLS2 EC_4.3 carbon-nitrogen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14354 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38046 No alias EC_4.3 carbon-nitrogen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo171056 SSL5, YLS2 Protein STRICTOSIDINE SYNTHASE-LIKE 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc02g082900.3.1 Solyc02g082900 Protein STRICTOSIDINE SYNTHASE-LIKE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010759_P002 LAP3, Zm00001e010759 Protein STRICTOSIDINE SYNTHASE-LIKE 13 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0016844 strictosidine synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR018119 Strictosidine_synth_cons-reg 150 234
No external refs found!