Aliases : LOC_Os07g40730
Description : chromatin remodeling factor (SMARCAL1)
Gene families : OG0002390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002390_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00045p00120010 | CHA18, CHR18,... | Chromatin organisation.chromatin remodeling... | 0.05 | OrthoFinder output from all 47 species | |
Cre03.g199350 | CHA18, CHR18 | Chromatin organisation.chromatin remodeling... | 0.01 | OrthoFinder output from all 47 species | |
Mp1g02820.1 | CHA18, CHR18 | chromatin remodeling factor (SMARCAL1) | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g41946 | CHA18, CHR18 | chromatin remodeling factor *(SMARCAL1) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g098860.2.1 | CHA18, CHR18,... | chromatin remodeling factor (SMARCAL1) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e035658_P002 | CHA18, CHR18,... | chromatin remodeling factor (SMARCAL1) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004519 | endonuclease activity | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
No external refs found! |