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  5. LOC_Os07g39270.1

LOC_Os07g39270.1 (GGPS1, LOC_Os07g39270)


Aliases : GGPS1, LOC_Os07g39270

Description : isoprenyl diphosphate synthase


Gene families : OG0001174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g39270.1
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00566p00010050 GGPS1,... Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
AT1G49530 GGPS6 geranylgeranyl pyrophosphate synthase 6 0.03 OrthoFinder output from all 47 species
AT2G23800 GGPS2, GGPS5 geranylgeranyl pyrophosphate synthase 2 0.06 OrthoFinder output from all 47 species
AT3G20160 No alias Terpenoid synthases superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29430 No alias Terpenoid synthases superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G32040 No alias Terpenoid synthases superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g046337 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Adi_g046342 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aspi01Gene01995.t1 GGPS1, Aspi01Gene01995 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aspi01Gene26021.t1 GGPS1, Aspi01Gene26021 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aspi01Gene55727.t1 GGPS1, Aspi01Gene55727 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Dcu_g09173 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Ehy_g18204 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Gb_39712 GGPS1 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
LOC_Os01g14630.1 GGPS1, LOC_Os01g14630 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Len_g07265 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
MA_10429756g0010 GGPS1 isoprenyl diphosphate synthase 0.05 OrthoFinder output from all 47 species
MA_543467g0010 No alias isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species
Pnu_g25568 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Solyc02g085720.1.1 GGPS1, Solyc02g085720 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Solyc11g011240.1.1 GGPS1, Solyc11g011240 isoprenyl diphosphate synthase 0.03 OrthoFinder output from all 47 species
Spa_g07273 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g30144 GGPS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Zm00001e035362_P001 GGPS1, Zm00001e035362 isoprenyl diphosphate synthase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 93 336
No external refs found!