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  5. LOC_Os07g35610.1

LOC_Os07g35610.1 (LOC_Os07g35610)


Aliases : LOC_Os07g35610

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 94.4)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g35610.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT2G35140 No alias DCD (Development and Cell Death) domain protein 0.02 OrthoFinder output from all 47 species
AT5G42050 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Adi_g023543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g050313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g104495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g60044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G040700.1 Ceric.18G040700 not classified & original description: pacid=50621172... 0.05 OrthoFinder output from all 47 species
Ehy_g03573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10391 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032736001 No alias B2 protein OS=Daucus carota 0.02 OrthoFinder output from all 47 species
Gb_10275 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 97.4) 0.03 OrthoFinder output from all 47 species
Len_g04611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_26274g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g43148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023143 No alias not classified & original description: CDS=257-1618 0.02 OrthoFinder output from all 47 species
Spa_g02573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38709 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025841_P002 Zm00001e025841 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 116.0) 0.02 OrthoFinder output from all 47 species
Zm00001e031088_P005 Zm00001e031088 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 34 171
IPR006652 Kelch_1 579 617
IPR006652 Kelch_1 531 565
IPR006652 Kelch_1 481 523
IPR006652 Kelch_1 623 667
No external refs found!