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  5. LOC_Os07g34830.1

LOC_Os07g34830.1 (LOC_Os07g34830)


Aliases : LOC_Os07g34830

Description : Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana (sp|q8lps2|acd6_arath : 95.5)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g34830.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AT4G03460 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G14390 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01001651001 No alias Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species
GSVIVT01010730001 No alias Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species
GSVIVT01013569001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01013586001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01013593001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00335 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22741 No alias Ankyrin repeat-containing protein At5g02620... 0.05 OrthoFinder output from all 47 species
Gb_26480 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Gb_26481 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g15950.1 LOC_Os09g15950 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14570.1 LOC_Os11g14570 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Solyc07g061760.3.1 Solyc07g061760 Ankyrin repeat-containing protein At5g02620... 0.03 OrthoFinder output from all 47 species
Zm00001e012087_P001 Zm00001e012087 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024554_P002 Zm00001e024554 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 68 126
IPR020683 DUF3447 220 281
IPR020683 DUF3447 289 350
IPR020683 DUF3447 148 204
No external refs found!