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  5. LOC_Os07g34440.1

LOC_Os07g34440.1 (LOC_Os07g34440)


Aliases : LOC_Os07g34440

Description : GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana (sp|q680c0|gdl62_arath : 119.0)


Gene families : OG0000838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000838_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g34440.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT5G24200 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g05860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11900.t1 Aspi01Gene11900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34990.t1 Aspi01Gene34990 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61325.t1 Aspi01Gene61325 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68605.t1 Aspi01Gene68605 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68810.t1 Aspi01Gene68810 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038695001 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_11151 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_11156 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_21917 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_28092 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g47610.1 LOC_Os01g47610 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g34400.1 LOC_Os07g34400 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g34420.1 LOC_Os07g34420 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os07g39810.1 LOC_Os07g39810 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_18439g0010 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g10520.1 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mpzg01010.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013623 No alias not classified & original description: CDS=279-1445 0.03 OrthoFinder output from all 47 species
Solyc02g070610.3.1 Solyc02g070610 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g056250.3.1 Solyc07g056250 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g10826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019946_P001 Zm00001e019946 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e024790_P002 Zm00001e024790 GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!