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  5. LOC_Os07g29200.1

LOC_Os07g29200.1 (LOC_Os07g29200)


Aliases : LOC_Os07g29200

Description : no hits & (original description: none)


Gene families : OG0002694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002694_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g29200.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027886001 No alias Probable (S)-tetrahydroprotoberberine... 0.04 OrthoFinder output from all 47 species
Gb_22960 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os12g16640.1 MEE61, PPO2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426263g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10430341g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_719785g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc03g045140.4.1 Solyc03g045140 Probable (S)-tetrahydroprotoberberine... 0.03 OrthoFinder output from all 47 species
Solyc04g056450.4.1 Solyc04g056450 Probable (S)-tetrahydroprotoberberine... 0.03 OrthoFinder output from all 47 species
Solyc09g090510.3.1 Solyc09g090510 Probable (S)-tetrahydroprotoberberine... 0.02 OrthoFinder output from all 47 species
Tin_g07933 No alias cyclopropane fatty acid synthase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020986_P001 Zm00001e020986 (S)-coclaurine N-methyltransferase OS=Papaver somniferum... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!