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  5. LOC_Os07g12900.1

LOC_Os07g12900.1 (ATHMA2, HMA2, LOC_Os07g12900)


Aliases : ATHMA2, HMA2, LOC_Os07g12900

Description : P1B-type heavy metal cation-transporting ATPase (HMA)


Gene families : OG0001874 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001874_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g12900.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Ala_g28963 ATHMA4, HMA4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g33571 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Gb_30489 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase (HMA) 0.02 OrthoFinder output from all 47 species
Nbi_g25206 ATHMA2, HMA2 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 48 104
No external refs found!