LOC_Os07g07790.1 (LOC_Os07g07790)


Aliases : LOC_Os07g07790

Description : xylogen-type arabinogalactan protein


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g07790.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00228410 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00002p00272110 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AMTR_s00048p00225010 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
AMTR_s01773p00009760 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G05450 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT1G18280 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT1G55260 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT2G13820 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT2G44300 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT2G48130 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT2G48140 EDA4 Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G22570 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT3G22600 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.12 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT4G12360 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT4G14815 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G13900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Aev_g42840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g36424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41189 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02338.t1 Aspi01Gene02338 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03812.t1 Aspi01Gene03812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12060.t1 Aspi01Gene12060 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene13486.t1 Aspi01Gene13486 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene29219.t1 Aspi01Gene29219 arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33061.t1 Aspi01Gene33061 arabinogalactan protein *(Xylogen) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene34239.t1 Aspi01Gene34239 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44733.t1 Aspi01Gene44733 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene55567.t1 Aspi01Gene55567 arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033619 No alias not classified & original description: CDS=1-465 0.05 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G082200.1 Ceric.01G082200 not classified & original description: pacid=50591603... 0.03 OrthoFinder output from all 47 species
Ceric.05G095500.1 Ceric.05G095500 not classified & original description: pacid=50577222... 0.03 OrthoFinder output from all 47 species
Ceric.12G092700.1 Ceric.12G092700 not classified & original description: pacid=50601364... 0.06 OrthoFinder output from all 47 species
Ceric.35G030300.1 Ceric.35G030300 not classified & original description: pacid=50581753... 0.03 OrthoFinder output from all 47 species
Dac_g08118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15255 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06089 LTPG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g39546 LTPG1 arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42665 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04455 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11056 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001178001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
GSVIVT01001181001 EDA4 No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01001350001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.11 OrthoFinder output from all 47 species
GSVIVT01018010001 No alias No description available 0.08 OrthoFinder output from all 47 species
GSVIVT01025413001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01029796001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01032956001 No alias Lipid transfer-like protein VAS OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01917 No alias classical arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_02441 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_02443 No alias xylogen-type arabinogalactan protein 0.09 OrthoFinder output from all 47 species
Gb_02446 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Gb_02454 No alias xylogen-type arabinogalactan protein 0.09 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_02458 No alias xylogen-type arabinogalactan protein 0.12 OrthoFinder output from all 47 species
Gb_06123 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_06428 No alias xylogen-type arabinogalactan protein 0.11 OrthoFinder output from all 47 species
Gb_08579 No alias xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Gb_13133 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_24349 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Gb_28256 No alias xylogen-type arabinogalactan protein 0.09 OrthoFinder output from all 47 species
Gb_33141 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
LOC_Os03g20760.1 LOC_Os03g20760 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.08 OrthoFinder output from all 47 species
LOC_Os03g57990.1 LOC_Os03g57990 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g58940.1 LOC_Os03g58940 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g47200.1 LOC_Os06g47200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os07g07860.1 LOC_Os07g07860 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g31013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g37455 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12260 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_113140g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_115537g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_124502g0010 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
MA_133359g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_133359g0030 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_1925g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_19325g0010 No alias xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
MA_26320g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_26320g0030 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_383975g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_43542g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_494876g0010 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
MA_50191g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
MA_64802g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_71069g0010 No alias xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
MA_76307g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_9903145g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g22240.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g18180.1 No alias xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Msp_g01019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27615 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31007 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31936 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59467 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_3790V3.1 Pp3c14_3790 Bifunctional inhibitor/lipid-transfer protein/seed... 0.01 OrthoFinder output from all 47 species
Ppi_g55727 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014611 No alias arabinogalactan protein *(Xylogen) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0169.g024327 No alias not classified & original description: CDS=1-432 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2896.g028490 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sam_g02332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc01g073680.4.1 Solyc01g073680 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Solyc03g005200.3.1 Solyc03g005200 xylogen-type arabinogalactan protein 0.1 OrthoFinder output from all 47 species
Solyc03g005210.4.1 Solyc03g005210 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g119620.1.1 Solyc03g119620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc06g054060.1.1 Solyc06g054060 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc06g069110.4.1 Solyc06g069110 xylogen-type arabinogalactan protein 0.05 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Solyc09g065420.3.1 Solyc09g065420 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc09g082270.4.1 Solyc09g082270 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc09g082280.3.1 Solyc09g082280 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Solyc09g082290.3.1 Solyc09g082290 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g05603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11499 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e001521_P002 Zm00001e001521 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e001853_P001 Zm00001e001853 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005336_P001 Zm00001e005336 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e005959_P003 Zm00001e005959 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.07 OrthoFinder output from all 47 species
Zm00001e006054_P001 Zm00001e006054 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e011462_P001 Zm00001e011462 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species
Zm00001e011883_P002 Zm00001e011883 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
Zm00001e022825_P001 Zm00001e022825 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Zm00001e032912_P001 Zm00001e032912 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e035593_P001 Zm00001e035593 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038813_P001 Zm00001e038813 xylogen-type arabinogalactan protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 10 116
No external refs found!