Aliases : YAB2, LOC_Os07g06620
Description : transcription factor (YABBY)
Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os07g06620.2 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00199030 | CRC,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00078p00029420 | YAB5,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00085p00032940 | AFO, YAB1, FIL,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
AT1G23420 | INO | Plant-specific transcription factor YABBY family protein | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012246001 | CRC | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01013778001 | INO | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01027648001 | AFO, YAB1, FIL | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037533001 | YAB2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
Gb_22423 | YAB5 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
MA_407206g0010 | YAB5 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Solyc01g010240.3.1 | CRC, Solyc01g010240 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Solyc05g005240.2.1 | INO, Solyc05g005240 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g073920.3.1 | YAB2, Solyc06g073920 | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Solyc08g079100.3.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g071810.2.1 | YAB2, Solyc11g071810 | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000845_P005 | CRC, Zm00001e000845 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003268_P003 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e004396_P001 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012387_P001 | YAB5, Zm00001e012387 | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012388_P001 | YAB5, Zm00001e012388 | transcription factor (YABBY) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e017951_P002 | YAB5, Zm00001e017951 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e032845_P002 | YAB2, Zm00001e032845 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038717_P002 | CRC, Zm00001e038717 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007275 | multicellular organism development | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
BP | GO:0017148 | negative regulation of translation | IEP | HCCA |
MF | GO:0030597 | RNA glycosylase activity | IEP | HCCA |
MF | GO:0030598 | rRNA N-glycosylase activity | IEP | HCCA |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034249 | negative regulation of amide metabolic process | IEP | HCCA |
BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006780 | YABBY | 6 | 146 |
No external refs found! |