LOC_Os07g04020.1 (LOC_Os07g04020)


Aliases : LOC_Os07g04020

Description : EPF/EPFL precursor polypeptide


Gene families : OG0000344 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000344_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os07g04020.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270870 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.04 OrthoFinder output from all 47 species
AMTR_s00026p00199790 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00234600 evm_27.TU.AmTr_v1... Phytohormones.signalling peptides.CRP... 0.1 OrthoFinder output from all 47 species
AT4G14723 No alias BEST Arabidopsis thaliana protein match is:... 0.04 OrthoFinder output from all 47 species
AT4G37810 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
AT5G10310 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g16584 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08776 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21676 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02875 No alias EPF/EPFL precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06067 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Als_g08085 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Als_g47557 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51212 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g00870 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01444 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03742 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12447 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13197 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13829 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20591 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47339 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g59196 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19202.t1 Aspi01Gene19202 EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24913.t1 Aspi01Gene24913 EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36510.t1 Aspi01Gene36510 EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37827.t1 EPFL6, CHAL,... EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48274.t1 Aspi01Gene48274 EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53309.t2 Aspi01Gene53309 EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53522.t1 EPFL6, CHAL,... EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66861.t1 Aspi01Gene66861 EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015717 No alias EPF/EPFL precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0060.g034792 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0084.g038996 No alias EPF/EPFL precursor polypeptide & original description: CDS=42-764 0.05 OrthoFinder output from all 47 species
Cba_g02257 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13194 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16787 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G072100.1 Ceric.18G072100 EPF/EPFL precursor polypeptide & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G060200.1 Ceric.35G060200 not classified & original description: pacid=50581820... 0.03 OrthoFinder output from all 47 species
Dac_g02616 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09284 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10192 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12164 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g14162 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03555 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10637 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12624 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29125 No alias EPF/EPFL precursor polypeptide & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g10546 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17400 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018037001 No alias Phytohormones.signalling peptides.CRP... 0.07 OrthoFinder output from all 47 species
Gb_22501 EPFL6, CHAL EPF/EPFL precursor polypeptide 0.04 OrthoFinder output from all 47 species
LOC_Os01g60900.1 LOC_Os01g60900 EPF/EPFL precursor polypeptide 0.06 OrthoFinder output from all 47 species
LOC_Os02g51950.1 LOC_Os02g51950 EPF/EPFL precursor polypeptide 0.04 OrthoFinder output from all 47 species
Len_g00299 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13007 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Len_g17309 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23133 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
MA_105123g0010 No alias EPF/EPFL precursor polypeptide 0.04 OrthoFinder output from all 47 species
MA_112390g0010 No alias EPF/EPFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_184852g0010 No alias EPF/EPFL precursor polypeptide 0.03 OrthoFinder output from all 47 species
MA_38686g0020 No alias EPF/EPFL precursor polypeptide 0.04 OrthoFinder output from all 47 species
Msp_g12920 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17083 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29167 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30719 No alias EPF/EPFL precursor polypeptide & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g00494 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02139 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26109 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45588 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39321 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g28735 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18391 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25200 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55692 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002848 No alias EPF/EPFL precursor polypeptide & original description: CDS=1-825 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006805 No alias EPF/EPFL precursor polypeptide & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017031 No alias EPF/EPFL precursor polypeptide & original description:... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024912 No alias EPF/EPFL precursor polypeptide & original description:... 0.05 OrthoFinder output from all 47 species
Sam_g18543 No alias EPF/EPFL precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g091910.2.1 Solyc02g091910 EPF/EPFL precursor polypeptide 0.06 OrthoFinder output from all 47 species
Solyc09g082620.3.1 Solyc09g082620 EPF/EPFL precursor polypeptide 0.06 OrthoFinder output from all 47 species
Spa_g04520 No alias EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g46492 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13699 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g19555 EPFL6, CHAL EPF/EPFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24305 No alias EPF/EPFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!