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Aliases : AGL7, AP1, LOC_Os07g01820
Description : transcription factor (MADS/AGL)
Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os07g01820.1 | |
| Cluster | HCCA: Cluster_422 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00013p00103080 | AGL9, SEP3,... | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00013p00114420 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G26310 | AGL10, CAL1, CAL | K-box region and MADS-box transcription factor family protein | 0.17 | OrthoFinder output from all 47 species | |
| AT1G69120 | AGL7, AP1 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G45650 | AGL6 | AGAMOUS-like 6 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G02310 | AGL4, SEP2 | K-box region and MADS-box transcription factor family protein | 0.01 | OrthoFinder output from all 47 species | |
| AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G62165 | AGL42 | AGAMOUS-like 42 | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g045544 | No alias | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g051961 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g106519 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g06477 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g33718 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38807 | AGL91 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27230 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15820.t1 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene17806.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene17826.t1 | SHP2, AGL5,... | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene52215.t1 | GL19, AGL19,... | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene68989.t2 | SOC1, AGL20,... | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene72145.t2 | AGL30, Aspi01Gene72145 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0009.g011735 | STK, AGL11 | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014286 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07874 | AGL13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g16031 | SHP2, AGL5 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cre11.g467577 | AGL16 | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13563 | AGL15 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g34128 | AGL21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38503 | AGL42 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g49896 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g07431 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008139001 | AGL2, SEP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01012110001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01012250001 | AGL7, AP1 | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018450001 | AGL6 | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025945001 | STK, AGL11 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01026207001 | AGL32, TT16, ABS | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01035477001 | AGL30 | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_41550 | No alias | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os01g11510.1 | LOC_Os01g11510 | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g54170.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g06750.1 | AGL9, SEP3,... | transcription factor (MADS/AGL) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g09144 | STK, AGL11 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g41503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g56241 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08300 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g40583 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_1090469g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_121040g0010 | AGL3, SEP4 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_15122g0010 | AGL16 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_16629g0010 | ANR1, AGL44 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| MA_19296g0010 | AGL9, SEP3 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_20180g0010 | AGL24 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_57186g0010 | AGL15 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| MA_607627g0010 | SOC1, AGL20, ATSOC1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g06990 | AGL16 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11231 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11366 | AGL3, SEP4 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04651 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08987 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g56067 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001705 | AGL32, TT16, ABS | MADS/AGL-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012202 | No alias | MADS/AGL-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g065730.2.1 | AGL8, FUL, Solyc02g065730 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114840.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.07 | OrthoFinder output from all 47 species | |
| Solyc04g005320.3.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g012020.4.1 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g059970.4.1 | PI, Solyc06g059970 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g069430.3.1 | AGL8, FUL, Solyc06g069430 | transcription factor (MADS/AGL) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g150109.1.1 | SOC1, AGL20,... | MADS-box protein AGL42 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g017630.3.1 | SOC1, AGL20,... | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g02544 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g06302 | AGL6 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15478 | GL19, AGL19 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g29118 | AGL21 | MADS/AGL-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g29715 | SOC1, AGL20, ATSOC1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g31312 | AGL2, SEP1 | MADS/AGL-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005708_P002 | AGL2, SEP1,... | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e007902_P001 | AGL16, Zm00001e007902 | transcription factor (MADS/AGL) | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e011565_P001 | AGL7, AP1, Zm00001e011565 | MADS-box transcription factor 15 OS=Oryza sativa subsp.... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e012024_P001 | AGL4, SEP2,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012026_P002 | AGL7, AP1, Zm00001e012026 | transcription factor (MADS/AGL) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015924_P003 | SVP, AGL22,... | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023236_P005 | AGL6, Zm00001e023236 | transcription factor (MADS/AGL) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e040374_P001 | AGL48, Zm00001e040374 | transcription factor (MADS/AGL) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
| CC | GO:0005634 | nucleus | IEA | Interproscan |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |