1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g49000.1

LOC_Os06g49000.1 (LOC_Os06g49000)


Aliases : LOC_Os06g49000

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g49000.1

Target Alias Description ECC score Gene Family Method Actions
AT5G45540 No alias Protein of unknown function (DUF594) 0.04 OrthoFinder output from all 47 species
Ala_g34202 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene22608.t1 Aspi01Gene22608 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22609.t1 Aspi01Gene22609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22616.t1 Aspi01Gene22616 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012752 No alias not classified & original description: CDS=1-2583 0.04 OrthoFinder output from all 47 species
Ceric.27G066800.1 Ceric.27G066800 not classified & original description: pacid=50605337... 0.03 OrthoFinder output from all 47 species
Ceric.37G006000.1 Ceric.37G006000 not classified & original description: pacid=50616778... 0.04 OrthoFinder output from all 47 species
Dcu_g11608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010808001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014456001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os07g01840.1 LOC_Os07g01840 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g09570.1 LOC_Os08g09570 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g36506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008125 No alias not classified & original description: CDS=1-2199 0.02 OrthoFinder output from all 47 species
Zm00001e024441_P003 Zm00001e024441 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e036718_P001 Zm00001e036718 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040439_P001 Zm00001e040439 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 55 396
IPR007658 DUF594 736 789
No external refs found!