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  5. LOC_Os06g46880.1

LOC_Os06g46880.1 (LOC_Os06g46880)


Aliases : LOC_Os06g46880

Description : no hits & (original description: none)


Gene families : OG0003838 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003838_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g46880.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00241450 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Ceric.25G051900.1 Ceric.25G051900 not classified & original description: pacid=50594529... 0.08 OrthoFinder output from all 47 species
Cre04.g222300 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g06049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014608001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_16843 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_73776g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_82814g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g20260.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g16011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g083200.2.1 Solyc10g083200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e030300_P002 Zm00001e030300 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 124 169
No external refs found!