LOC_Os06g44610.1 (LOC_Os06g44610)


Aliases : LOC_Os06g44610

Description : CASP-like protein 2C1 OS=Oryza sativa subsp. japonica (sp|q67w83|cspld_orysj : 197.0)


Gene families : OG0000811 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000811_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g44610.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00209400 evm_27.TU.AmTr_v1... CASP-like protein 2C1 OS=Sorghum bicolor 0.05 OrthoFinder output from all 47 species
AMTR_s00028p00153320 evm_27.TU.AmTr_v1... CASP-like protein 2B1 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00032340 evm_27.TU.AmTr_v1... CASP-like protein 2A1 OS=Oryza sativa subsp. japonica 0.08 OrthoFinder output from all 47 species
AT1G17200 No alias Uncharacterised protein family (UPF0497) 0.1 OrthoFinder output from all 47 species
AT2G35760 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT3G14380 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT4G25830 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT5G54980 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
Adi_g005547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g031098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115376 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g58918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06538 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20279 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18889.t1 Aspi01Gene18889 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18890.t1 Aspi01Gene18890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025274 No alias not classified & original description: CDS=467-1165 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030020 No alias not classified & original description: CDS=85-666 0.05 OrthoFinder output from all 47 species
Azfi_s0261.g060778 No alias not classified & original description: CDS=437-994 0.02 OrthoFinder output from all 47 species
Azfi_s0381.g067386 No alias not classified & original description: CDS=336-929 0.07 OrthoFinder output from all 47 species
Ceric.02G018700.1 Ceric.02G018700 not classified & original description: pacid=50584078... 0.08 OrthoFinder output from all 47 species
Ceric.08G055900.1 Ceric.08G055900 not classified & original description: pacid=50637769... 0.04 OrthoFinder output from all 47 species
Ceric.23G007600.1 Ceric.23G007600 not classified & original description: pacid=50611535... 0.06 OrthoFinder output from all 47 species
Ceric.23G007900.1 Ceric.23G007900 not classified & original description: pacid=50611019... 0.05 OrthoFinder output from all 47 species
Dac_g09088 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45174 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g46991 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g29089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00472 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04283 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g11429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35957 No alias CASP-like protein 2A1 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
Gb_41333 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g08110.1 LOC_Os02g08110 CASP-like protein 2C2 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os12g32970.1 LOC_Os12g32970 CASP-like protein 2B1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g04097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431555g0010 No alias CASP-like protein 2A3 OS=Picea sitchensis... 0.03 OrthoFinder output from all 47 species
MA_8167318g0010 No alias CASP-like protein 2BC1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Mp5g15430.1 No alias CASP-like protein 2U1 OS=Marchantia polymorpha... 0.04 OrthoFinder output from all 47 species
Msp_g24943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15117 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40267 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10053 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29949 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007556 No alias not classified & original description: CDS=113-772 0.04 OrthoFinder output from all 47 species
Sam_g02059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo418756 No alias CASP-like protein 2U8 OS=Selaginella moellendorffii 0.02 OrthoFinder output from all 47 species
Smo439258 No alias SCA7 domain-containing protein SELMODRAFT_439258... 0.03 OrthoFinder output from all 47 species
Solyc05g054190.4.1 Solyc05g054190 CASP-like protein 2B1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc07g006855.2.1 Solyc07g006855 CASP-like protein 2C1 OS=Populus trichocarpa... 0.06 OrthoFinder output from all 47 species
Solyc07g056040.3.1 Solyc07g056040 CASP-like protein 2A1 OS=Vitis vinifera... 0.07 OrthoFinder output from all 47 species
Solyc10g007660.3.1 Solyc10g007660 CASP-like protein 2A1 OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
Solyc12g005070.2.1 Solyc12g005070 CASP-like protein 2D1 OS=Vitis vinifera... 0.04 OrthoFinder output from all 47 species
Spa_g00241 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013801_P001 Zm00001e013801 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040663_P001 Zm00001e040663 CASP-like protein 2A2 OS=Zea mays (sp|b6sr79|cspl7_maize : 271.0) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035434 copper ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 16 164
No external refs found!