LOC_Os06g44320.1 (LOC_Os06g44320)


Aliases : LOC_Os06g44320

Description : transcription factor (bHLH)


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g44320.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00228840 UPB1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G70270 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
AT2G43060 IBH1 ILI1 binding bHLH 1 0.07 OrthoFinder output from all 47 species
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G17100 No alias sequence-specific DNA binding transcription factors 0.03 OrthoFinder output from all 47 species
AT4G30410 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
AT5G57780 No alias EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12... 0.04 OrthoFinder output from all 47 species
Adi_g029675 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32990 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20907 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37001 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05093 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29507.t1 Aspi01Gene29507 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03039 IBH1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29136 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13089 IBH1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30108 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os02g54870.1 LOC_Os02g54870 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g56500.1 LOC_Os04g56500 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_136890g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_194304g0010 No alias transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_209740g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_211492g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_29054g0010 No alias transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_36564g0010 No alias transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
MA_44257g0010 No alias transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
MA_66021g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_695114g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_8629146g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_92262g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_93614g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05431 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g058670.3.1 Solyc01g058670 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc01g079270.1.1 UPB1, Solyc01g079270 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc07g056360.1.1 PAR1, HLH1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g38345 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023717_P001 Zm00001e023717 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!