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Aliases : LOC_Os06g42490
Description : no hits & (original description: none)
Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os06g42490.1 | |
| Cluster | HCCA: Cluster_143 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00070p00141920 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00111920 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AT3G48050 | No alias | BAH domain ;TFIIS helical bundle-like domain | 0.03 | OrthoFinder output from all 47 species | |
| AT3G48060 | No alias | BAH domain ;TFIIS helical bundle-like domain | 0.06 | OrthoFinder output from all 47 species | |
| AT4G24200 | No alias | Transcription elongation factor (TFIIS) family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g097046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g47750 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33736 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g62378 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g17691 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene21972.t1 | Aspi01Gene21972 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0030.g024339 | No alias | not classified & original description: CDS=1-3606 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0100.g044240 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0124.g048462 | No alias | not classified & original description: CDS=36-3404 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0276.g061462 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g17046 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g62788 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G029300.1 | Ceric.02G029300 | not classified & original description: pacid=50584188... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.11G079200.1 | Ceric.11G079200 | not classified & original description: pacid=50595155... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.16G046100.1 | Ceric.16G046100 | not classified & original description: pacid=50589203... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.24G078000.1 | Ceric.24G078000 | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15540 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07942 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g24371 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007806001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009936001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024041001 | No alias | No description available | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05690 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16486 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432920g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_33300g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_39143g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g16160.1 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g16230.1 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g00447 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06454 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g13846 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005665 | No alias | not classified & original description: CDS=481-3921 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g04915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10559 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g18607 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29218 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g114060.3.1 | Solyc03g114060 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g071350.4.1 | Solyc06g071350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g37189 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13967 | No alias | regulatory protein *(SUO) of miRNA biogenesis pathway &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002441_P003 | Zm00001e002441 | no hits & (original description: none) | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e013353_P001 | Zm00001e013353 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e037792_P001 | Zm00001e037792 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e037793_P001 | Zm00001e037793 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |