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  5. LOC_Os06g41790.1

LOC_Os06g41790.1 (LOC_Os06g41790)


Aliases : LOC_Os06g41790

Description : Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana (sp|q9m1s3|arp1_arath : 106.0)


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g41790.1

Target Alias Description ECC score Gene Family Method Actions
Als_g19813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100311 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc04g049920.4.1 Solyc04g049920 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e001294_P001 Zm00001e001294 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e015636_P001 Zm00001e015636 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e030837_P006 Zm00001e030837 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 35 90
No external refs found!