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  5. LOC_Os06g29950.1

LOC_Os06g29950.1 (LOC_Os06g29950)


Aliases : LOC_Os06g29950

Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g29950.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00167550 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AT1G66780 No alias MATE efflux family protein 0.06 OrthoFinder output from all 47 species
AT5G38030 No alias MATE efflux family protein 0.02 OrthoFinder output from all 47 species
Dac_g33217 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01004076001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01008369001 No alias Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
GSVIVT01012737001 No alias Solute transport.carrier-mediated transport.MOP... 0.06 OrthoFinder output from all 47 species
GSVIVT01020806001 TT12, ATTT12 Solute transport.carrier-mediated transport.MOP... 0.08 OrthoFinder output from all 47 species
GSVIVT01029136001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Gb_25415 TT12, ATTT12 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
LOC_Os01g56050.1 LOC_Os01g56050 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g37470.1 LOC_Os03g37470 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
LOC_Os04g30490.1 LOC_Os04g30490 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
LOC_Os10g20380.1 LOC_Os10g20380 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_10429202g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_10434918g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_14711g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_14977g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_170499g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_23645g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
MA_4390g0010 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_790852g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_9918531g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc07g007480.2.1 Solyc07g007480 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e020141_P001 Zm00001e020141 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 1 113
IPR002528 MATE_fam 329 437
No external refs found!