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  5. LOC_Os06g14350.1

LOC_Os06g14350.1 (LOC_Os06g14350)


Aliases : LOC_Os06g14350

Description : caleosin


Gene families : OG0001041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g14350.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G70670 No alias Caleosin-related family protein 0.05 OrthoFinder output from all 47 species
Ala_g11594 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52137 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g46293 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene30858.t1 Aspi01Gene30858 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G095000.1 CLO-3, RD20,... Caleosin-type peroxygenase & original description:... 0.05 OrthoFinder output from all 47 species
Gb_07562 CLO-3, RD20 caleosin 0.03 OrthoFinder output from all 47 species
Gb_39637 CLO-3, RD20 caleosin 0.04 OrthoFinder output from all 47 species
Lfl_g25670 ATPXG2 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g05270.1 CLO-3, RD20 caleosin 0.02 OrthoFinder output from all 47 species
Msp_g08244 CLO1, ATS1, ATPXG1 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16427 No alias Caleosin-type peroxygenase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44656 No alias Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41578 CLO-3, RD20 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06119 ATPXG2 Caleosin-type peroxygenase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42381 ATPXG2 Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27451 No alias Caleosin-type peroxygenase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g005410.4.1 Solyc01g005410 caleosin 0.04 OrthoFinder output from all 47 species
Solyc04g007960.4.1 Solyc04g007960 caleosin 0.03 OrthoFinder output from all 47 species
Zm00001e036026_P001 Zm00001e036026 caleosin 0.03 OrthoFinder output from all 47 species
Zm00001e041216_P001 CLO1, ATS1,... caleosin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR007736 Caleosin-related 37 204
No external refs found!