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  5. LOC_Os06g14190.1

LOC_Os06g14190.1 (ATNFXL1, NFXL1, LOC_Os06g14190)


Aliases : ATNFXL1, NFXL1, LOC_Os06g14190

Description : transcriptional repressor (NF-X1)


Gene families : OG0006722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g14190.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G10170 ATNFXL1, NFXL1 NF-X-like 1 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020537.42 ATNFXL1, NFXL1 NF-X1-type zinc finger protein NFXL2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g08822 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04993 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30552 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38467 No alias transcriptional repressor *(NF-X1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g118420.4.1 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.04 OrthoFinder output from all 47 species
Tin_g09218 ATNFXL1, NFXL1 transcriptional repressor *(NF-X1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e030975_P001 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.02 OrthoFinder output from all 47 species
Zm00001e036022_P001 ATNFXL1, NFXL1,... transcriptional repressor (NF-X1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR000967 Znf_NFX1 231 248
IPR000967 Znf_NFX1 289 306
IPR000967 Znf_NFX1 167 184
IPR000967 Znf_NFX1 114 129
IPR000967 Znf_NFX1 384 401
IPR000967 Znf_NFX1 531 553
IPR000967 Znf_NFX1 494 510
No external refs found!