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  5. LOC_Os06g12990.1

LOC_Os06g12990.1 (LOC_Os06g12990)


Aliases : LOC_Os06g12990

Description : component TRM8 of TRM8-TRM82 tRNA guanosine-methyltransferase complex


Gene families : OG0005798 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005798_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12990.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Cre07.g314550 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
MA_19332g0020 No alias tRNA (guanine-N(7)-)-methyltransferase OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc02g068650.2.1 Solyc02g068650 component TRM8 of TRM8-TRM82 tRNA... 0.02 OrthoFinder output from all 47 species
Spa_g25721 No alias EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEA Interproscan
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003358 tRNA_(Gua-N-7)_MeTrfase_Trmb 75 249
No external refs found!