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  5. LOC_Os06g12210.1

LOC_Os06g12210.1 (LOC_Os06g12210)


Aliases : LOC_Os06g12210

Description : transcription factor (bHLH)


Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g12210.1

Target Alias Description ECC score Gene Family Method Actions
AT1G26945 KDR basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G47710 BNQ3, BHLH161 BANQUO 3 0.04 OrthoFinder output from all 47 species
Gb_33750 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g54900.1 KDR, LOC_Os04g54900 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_156285g0010 KDR transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g005660.4.1 KDR, Solyc04g005660 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 15 55
No external refs found!