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  5. LOC_Os06g11640.1

LOC_Os06g11640.1 (LOC_Os06g11640)


Aliases : LOC_Os06g11640

Description : no hits & (original description: none)


Gene families : OG0004425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g11640.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Ceric.12G087500.1 Ceric.12G087500 not classified & original description: pacid=50601462... 0.02 OrthoFinder output from all 47 species
Cre13.g580650 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01009068001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_10623 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036137_P001 Zm00001e036137 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0019211 phosphatase activator activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004327 Phstyr_phstse_ac 97 394
No external refs found!