- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : BIP1, LOC_Os06g10990
Description : Luminal-binding protein 4 OS=Nicotiana tabacum (sp|q03684|bip4_tobac : 227.0)
Gene families : OG0000109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000109_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00199970 | BIP, BIP2,... | Luminal-binding protein OS=Solanum lycopersicum | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035631 | BIP, BIP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055293 | BIP, BIP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082709 | BIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10616 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g40120 | AT-HSC70-1,... | chaperone *(Hsp70) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g45286 | ATHSP70, HSP70 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03397 | BIP, BIP2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene53803.t1 | ATHSP70, HSP70,... | chaperone *(Hsp70) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G076800.1 | ATHSP70, HSP70,... | chaperone *(Hsp70) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g41592 | ERD2, HSP70T-1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12488 | ATHSP70, HSP70 | Probable mediator of RNA polymerase II transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_29748 | ATHSP70, HSP70 | Heat shock cognate 70 kDa protein OS=Petunia hybrida... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31906 | AT-HSC70-1,... | Probable mediator of RNA polymerase II transcription... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g30480.1 | BIP, BIP2, LOC_Os05g30480 | Heat shock 70 kDa protein BIP3 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18027 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g41304 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06623 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g15626 | ATHSP70, HSP70 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g24188 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_160636g0010 | ATHSP70, HSP70 | Probable mediator of RNA polymerase II transcription... | 0.03 | OrthoFinder output from all 47 species | |
| MA_528985g0010 | BIP1 | Luminal-binding protein OS=Solanum lycopersicum... | 0.03 | OrthoFinder output from all 47 species | |
| MA_5946738g0010 | AT-HSC70-1,... | Probable mediator of RNA polymerase II transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63141 | ATHSP70, HSP70 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c12_9300V3.1 | Pp3c12_9300 | heat shock cognate protein 70-1 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g25380 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g011450.2.1 | Solyc04g011450 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g02575 | BIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12193 | BIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49584 | BIP, BIP2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50212 | BIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g18983 | ATHSP70, HSP70 | chaperone *(Hsp70) & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013126 | Hsp_70_fam | 67 | 447 |
| No external refs found! |