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  5. LOC_Os06g09810.1

LOC_Os06g09810.1 (LOC_Os06g09810)


Aliases : LOC_Os06g09810

Description : Ethylene-responsive transcription factor ERF017 OS=Arabidopsis thaliana (sp|q84qc2|erf17_arath : 102.0)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09810.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g041740 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g056044 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07933 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aev_g15993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21334 tny subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g21810 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Ala_g05453 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g25437 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g01979 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Aob_g13921 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g00507 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01047.t1 Aspi01Gene01047 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02047.t1 ATERF-9, ERF9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24331.t1 Aspi01Gene24331 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24332.t1 Aspi01Gene24332 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49729.t1 HRE2, Aspi01Gene49729 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49730.t1 HRE2, Aspi01Gene49730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56619.t1 RAP2.1, Aspi01Gene56619 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene61392.t1 DREB26, Aspi01Gene61392 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026640 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.05 OrthoFinder output from all 47 species
Cba_g10613 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g74107 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G034300.1 RAP2.1, Ceric.05G034300 not classified & original description: pacid=50578765... 0.05 OrthoFinder output from all 47 species
Ceric.15G043500.1 HRE2, Ceric.15G043500 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Ceric.24G043100.1 DEAR4, RAP2.10,... not classified & original description: pacid=50629256... 0.03 OrthoFinder output from all 47 species
Ceric.28G040800.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G046200.1 DREB26, Ceric.30G046200 not classified & original description: pacid=50608865... 0.04 OrthoFinder output from all 47 species
Dac_g19647 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19648 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33437 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g38923 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g45973 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Dde_g12767 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010629001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_06312 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_29263 DREB26 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Len_g07511 CRF3 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g15213 WIN1, SHN1 subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20338 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Len_g49762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_12671g0020 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_442451g0010 ERF1, ATERF1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_66742g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Nbi_g09224 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12369 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15421 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g15422 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g17161 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Ore_g27584 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g28637 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g44017 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g26932 ATERF13, ERF13, EREBP not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g02451 HRE2 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24749 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27452 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g10553 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985 CRF3 subgroup ERF-VI transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g051840.1.1 CRF4, Solyc06g051840 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g056590.2.1 ERF110, Solyc12g056590 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g04379 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g52172 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e041532_P001 Zm00001e041532 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 29 78
No external refs found!