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  5. LOC_Os06g09717.1

LOC_Os06g09717.1 (LOC_Os06g09717)


Aliases : LOC_Os06g09717

Description : Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana (sp|q9s7l5|erf18_arath : 105.0)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09717.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00148470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00132820 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT5G61590 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g045252 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g100845 ATERF3, ERF3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09757 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g21297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28369 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g10286 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g37143 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g57407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57703 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02788 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g18122 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24329.t1 Aspi01Gene24329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24330.t1 Aspi01Gene24330 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34430.t1 ATERF4, RAP2.5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37405.t1 Aspi01Gene37405 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56616.t1 DEAR3, Aspi01Gene56616 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058707 No alias subgroup ERF-X transcription factor & original... 0.07 OrthoFinder output from all 47 species
Cba_g03183 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G018900.1 ERF2, ATERF2,... subgroup ERF-VI transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g02651 DEAR2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g19647 DREB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32612 No alias subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33437 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g37778 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39353 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g40206 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10630 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dde_g18654 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30595 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g14006 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01028315001 ERF1, ATERF1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01032961001 LEP RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_02790 No alias transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_29168 DREB26 Ethylene-responsive transcription factor ERF012... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56150.1 LOC_Os04g56150 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
LOC_Os06g09760.1 ORA47, LOC_Os06g09760 Ethylene-responsive transcription factor ERF018... 0.06 OrthoFinder output from all 47 species
LOC_Os11g13840.1 tny, LOC_Os11g13840 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g09395 No alias subgroup ERF-X transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34118 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10020434g0010 No alias Ethylene-responsive transcription factor ERF013... 0.05 OrthoFinder output from all 47 species
MA_179692g0020 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_310g0010 ATERF-9, ERF9, ATERF9 Ethylene-responsive transcription factor 4 OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
MA_647924g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_93229g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_9905g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g24887 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09224 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g36884 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g01623 No alias subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g17077 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pir_g51435 CBF4, DREB1D transcription factor *(CBF/DREB1) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c16_13260V3.1 Pp3c16_13260 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_810V3.1 Pp3c5_810 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c5_820V3.1 Pp3c5_820 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g22142 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001285 No alias not classified & original description: CDS=1-1830 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016650 ERF38, ATERF38 subgroup ERF-III transcription factor & original... 0.06 OrthoFinder output from all 47 species
Sam_g25988 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Smo104978 TINY2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Smo38500 DREB2A, DREB2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species
Solyc01g090370.3.1 ATERF13, ERF13,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g006320.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc08g078410.2.1 Solyc08g078410 transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21202 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Zm00001e000611_P001 HRE1, Zm00001e000611 Ethylene-responsive transcription factor ERF073... 0.02 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
Zm00001e015429_P001 Zm00001e015429 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e023159_P001 Zm00001e023159 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.02 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 10 54
No external refs found!